Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00000755m |
Family | GH17 |
Protein Properties | Length: 339 Molecular Weight: 35640.4 Isoelectric Point: 9.4533 |
Chromosome | Chromosome/Scaffold: 0107947 Start: 1323 End: 3066 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 338 | 0 |
IGVCYGVVGNNLPSRSDVVQLYRSRGITGMRIYFPDRQALDALRGSGIALILDTGNDDDVLARLASSASTAASWVQTNVRPYYPAVNMKYIAVGNEVQGA AAQARILPAMRNLDAALAAAGLGGSIKVSTSVRFDAVASSFPPSSGVFAQGYMADVARYLAGTGAPLLANVYPYFAYRGNPRDISLGYATFRPGSTTVRD GGNGLTYTNLFDAMVDAVVAALEKAGAPNVRVVVSESGWPSAGGFAASVDNARSYNQGLIDHVGRGTPKRPGAALETFIFAMFNENQKGGDPTERNFGLF YPNKQPVYPIRF |
Full Sequence |
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Protein Sequence Length: 339 Download |
MARQQVASSM LAVALIVASI PTAVDSIGVC YGVVGNNLPS RSDVVQLYRS RGITGMRIYF 60 PDRQALDALR GSGIALILDT GNDDDVLARL ASSASTAASW VQTNVRPYYP AVNMKYIAVG 120 NEVQGAAAQA RILPAMRNLD AALAAAGLGG SIKVSTSVRF DAVASSFPPS SGVFAQGYMA 180 DVARYLAGTG APLLANVYPY FAYRGNPRDI SLGYATFRPG STTVRDGGNG LTYTNLFDAM 240 VDAVVAALEK AGAPNVRVVV SESGWPSAGG FAASVDNARS YNQGLIDHVG RGTPKRPGAA 300 LETFIFAMFN ENQKGGDPTE RNFGLFYPNK QPVYPIRF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 4.0e-159 | 27 | 338 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL35900.1 | 0 | 1 | 338 | 1 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
GenBank | EAY77183.1 | 0 | 1 | 338 | 1 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
RefSeq | NP_001045372.1 | 0 | 1 | 338 | 1 | 334 | Os01g0944700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140332.1 | 0 | 1 | 338 | 1 | 339 | hypothetical protein LOC100272379 [Zea mays] |
RefSeq | XP_002459077.1 | 0 | 1 | 338 | 1 | 336 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 27 | 338 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 27 | 338 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 27 | 338 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 338 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 338 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |