| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00000772m |
| Family | CBM49 |
| Protein Properties | Length: 629 Molecular Weight: 68866.4 Isoelectric Point: 8.3777 |
| Chromosome | Chromosome/Scaffold: 010341 Start: 7773 End: 10080 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 535 | 612 | 8.5e-35 |
| IEIEQNATRTWATRRATYRRYSVTVTNRSRKTVRELHLGVSELRGRLWGLDEARYGYVPPKWLPALRAGESLRFVYVQ | |||
| GH9 | 28 | 493 | 0 |
| DYALALKKSILYFEAQRSGVLPPNQRVTWRENSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWGILEYGKQMAAAGELRNAMDAVKWGTDYF IKAHPEPDVLYGEVGDGDTDHSCWQRPEDMSTSRQAFRIDPQNPGSDLAGETAAAMAAASLVFRNTYPGYANLLLEHSKQLFTFADKYRGKYDASITVAR NYYGSFSGYGDELLWAAAWLYEATEEGCYLEYLARNGDALGGTGWSINQFGWDVKYPGVQVLAAKFLLEGRAGAHAATLQRYRQNAEFFVCSCVGKGAVN VPRTPGGMMYHQRWNNLQFVTSASFLLTVYADYATRLPGSGGGGVRCPGGAARPYEILAFVRSQVNYILGDNPRGTSYMVGYGGSFPRQVHHRGASIVSV RKDPSFVSCQEGYSSWYPRQAGNPNVLEGAVVGGPDEYDDFADERNNYEQTEAATYNSAPLLGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MARNVMPLLG ILALASAVGM ASAAGGHDYA LALKKSILYF EAQRSGVLPP NQRVTWRENS 60 GLFDGKANGV DLVGGYYDAG DNVKFGLPMA FTVTMMSWGI LEYGKQMAAA GELRNAMDAV 120 KWGTDYFIKA HPEPDVLYGE VGDGDTDHSC WQRPEDMSTS RQAFRIDPQN PGSDLAGETA 180 AAMAAASLVF RNTYPGYANL LLEHSKQLFT FADKYRGKYD ASITVARNYY GSFSGYGDEL 240 LWAAAWLYEA TEEGCYLEYL ARNGDALGGT GWSINQFGWD VKYPGVQVLA AKFLLEGRAG 300 AHAATLQRYR QNAEFFVCSC VGKGAVNVPR TPGGMMYHQR WNNLQFVTSA SFLLTVYADY 360 ATRLPGSGGG GVRCPGGAAR PYEILAFVRS QVNYILGDNP RGTSYMVGYG GSFPRQVHHR 420 GASIVSVRKD PSFVSCQEGY SSWYPRQAGN PNVLEGAVVG GPDEYDDFAD ERNNYEQTEA 480 ATYNSAPLLG VLARLSGACG TGLEEYQLPP AAAVNQTTSS PHRRRRPHHG PPSPIEIEQN 540 ATRTWATRRA TYRRYSVTVT NRSRKTVREL HLGVSELRGR LWGLDEARYG YVPPKWLPAL 600 RAGESLRFVY VQPGTTPANV WVTGYKLV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 27 | 628 | 607 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 28 | 626 | 602 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 28 | 513 | 488 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 28 | 496 | 469 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 493 | 468 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25631.1 | 0 | 1 | 628 | 1 | 623 | unknown [Zea mays] |
| GenBank | ACN27322.1 | 0 | 67 | 628 | 5 | 561 | unknown [Zea mays] |
| GenBank | EAY96964.1 | 0 | 1 | 628 | 1 | 626 | hypothetical protein OsI_18884 [Oryza sativa Indica Group] |
| RefSeq | NP_001054920.1 | 0 | 2 | 628 | 7 | 629 | Os05g0212300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440792.1 | 0 | 1 | 628 | 1 | 627 | hypothetical protein SORBIDRAFT_09g006670 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 495 | 3 | 428 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1ksc_A | 0 | 27 | 495 | 3 | 428 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1ks8_A | 0 | 27 | 495 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 574 | 5 | 498 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 574 | 5 | 498 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
