Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00000791m |
Family | GH9 |
Protein Properties | Length: 437 Molecular Weight: 45900 Isoelectric Point: 6.2368 |
Chromosome | Chromosome/Scaffold: 0102925 Start: 71 End: 1878 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 3 | 318 | 0 |
DLVGGYYDAGDNVKFGLPMAFTVTMLSWSVAEFGDAMARDGGGHLEGARAAVRWGADYLLKAAAAAPGALYVQVGDPYQDHRCWERPEDMDTPRGVYKVT PDRPGSDVAGETAAALAAASLVFRACDPAYSSKLLQTARKVFDFADRYRGSYSESLSSVACPFYCSYSGYNDELLWAAAWLHLATAAGKGGAGAGNNSTA DAYYLSYIYSNGHTLGAEQDDFTFSWDDKRVGTKVLLATGFLQLLGGGDKAAQAAAAALQLYKAHADSYVCSLVPGAAGFQSSQYTPGGLLFKDGDSNMQ YVTSTAFLLLAYAKHL |
Full Sequence |
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Protein Sequence Length: 437 Download |
RADLVGGYYD AGDNVKFGLP MAFTVTMLSW SVAEFGDAMA RDGGGHLEGA RAAVRWGADY 60 LLKAAAAAPG ALYVQVGDPY QDHRCWERPE DMDTPRGVYK VTPDRPGSDV AGETAAALAA 120 ASLVFRACDP AYSSKLLQTA RKVFDFADRY RGSYSESLSS VACPFYCSYS GYNDELLWAA 180 AWLHLATAAG KGGAGAGNNS TADAYYLSYI YSNGHTLGAE QDDFTFSWDD KRVGTKVLLA 240 TGFLQLLGGG DKAAQAAAAA LQLYKAHADS YVCSLVPGAA GFQSSQYTPG GLLFKDGDSN 300 MQYVTSTAFL LLAYAKHLAG AGAAVSCGGG GGRWTTSWAR TRRGCRTWWG SAGGSRGASM 360 PSVRDHPARI GCDEGFRYLH SPEPDANVLV GALVGGPDGR DAYADSRDNY AQAEPSTYTN 420 VPLVGALAFL AGGRGH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 2.0e-14 | 378 | 428 | 51 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 2.0e-23 | 360 | 436 | 77 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-89 | 3 | 309 | 309 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 3.0e-99 | 3 | 432 | 449 | + endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-107 | 3 | 309 | 307 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05384.1 | 0 | 3 | 432 | 78 | 501 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ41304.1 | 0 | 3 | 432 | 78 | 501 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
RefSeq | NP_001045737.1 | 0 | 2 | 432 | 66 | 496 | Os02g0123700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060848.1 | 0 | 3 | 432 | 97 | 520 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002451429.1 | 0 | 2 | 434 | 81 | 512 | hypothetical protein SORBIDRAFT_04g001960 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 3 | 431 | 47 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ksc_A | 0 | 3 | 431 | 47 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ks8_A | 0 | 3 | 431 | 47 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 3 | 435 | 48 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 3 | 435 | 48 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT339454 | 306 | 4 | 309 | 0 |
DT339455 | 292 | 4 | 295 | 0 |
DR812674 | 237 | 73 | 309 | 0 |
DV700301 | 291 | 1 | 291 | 0 |
DT574316 | 281 | 1 | 281 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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