Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00000883m |
Family | GH3 |
Protein Properties | Length: 624 Molecular Weight: 67572.6 Isoelectric Point: 8.0008 |
Chromosome | Chromosome/Scaffold: 010251 Start: 2947 End: 6543 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 337 | 0 |
LSTRLGIPIIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVKRIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTSLISGLQ GEVPANDVGRPYVAGSKNVAACAKHYVGDGGTYMGINENNTIINTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGKKMHANHFLVTDFLKNKLKFRGFV ISDWEGIDRITSPPHANYSYSIEAGIGAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 624 Download |
MASLHKITLV LMFCLVALGR AEYLKYKDSK QPVAVRVKDL LSRMTLAEKI GQMTQIERKN 60 ATADALAKYF IGSVLSGGGS VPGPQASAQA WASMVTEMQK GALSTRLGIP IIYGIDAVHG 120 HNNVYKATIF PHNVGLGATR DPDLVKRIGE ATALEVRATG IPYVFAPCIA VCRDPRWGRC 180 YESYSEDPKV VQSMTSLISG LQGEVPANDV GRPYVAGSKN VAACAKHYVG DGGTYMGINE 240 NNTIINTHGL LSIHMPPYYN SIIRGVSTVM VSYSSWNGKK MHANHFLVTD FLKNKLKFRG 300 FVISDWEGID RITSPPHANY SYSIEAGIGA GIDMIMVPYK YTEFIDDLTT QVQNKVIPIS 360 RIDDAVYRIL RVKFSMGLFE NPYPDPSLAG ELGKQEHRDL AREAVRKSLV LLKNGKSSYT 420 PLLPLPKKAG KILVAGSHAD NLGNQCGGWT ISWQGQPGND ITAGTTILSG IKAAVDPSTQ 480 VVYSESPDST VLADKYDYAV VVVGEPPYAE TFGDNLNLTI PAPGPSVIQS VCKATKCVVV 540 LISGRPLVVE PYLGDMDAFV AAWLPGTEGQ GVADVLFGDY GFTGKLSRTW FKSVDQLPMN 600 VGDAHYDPLF PFGFGLTTMP RNE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-44 | 86 | 608 | 580 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-54 | 409 | 617 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-85 | 37 | 622 | 678 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-86 | 44 | 451 | 415 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-86 | 45 | 372 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49170.1 | 0 | 1 | 618 | 1 | 620 | beta-D-glucan exohydrolase, isoenzyme ExoII [Hordeum vulgare subsp. vulgare] |
GenBank | AAF79936.1 | 0 | 1 | 618 | 1 | 618 | exoglucanase precursor [Zea mays] |
GenBank | AAM13694.1 | 0 | 1 | 618 | 1 | 620 | beta-D-glucan exohydrolase [Triticum aestivum] |
RefSeq | NP_001051275.1 | 0 | 1 | 618 | 1 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 1 | 618 | 1 | 618 | exoglucanase1 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 22 | 618 | 1 | 599 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone-Isomerase Like Protein At5g05270 (Atchil) |
PDB | 1iex_A | 0 | 22 | 618 | 1 | 599 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone-Isomerase Like Protein At5g05270 (Atchil) |
PDB | 1iew_A | 0 | 22 | 618 | 1 | 599 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone-Isomerase Like Protein At5g05270 (Atchil) |
PDB | 1iev_A | 0 | 22 | 618 | 1 | 599 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone-Isomerase Like Protein At5g05270 (Atchil) |
PDB | 1ieq_A | 0 | 22 | 618 | 1 | 599 | A Chain A, Crystal Structure Of Arabidopsis Thaliana Chalcone-Isomerase Like Protein At5g05270 (Atchil) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |