Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00001113m |
Family | GT14 |
Protein Properties | Length: 229 Molecular Weight: 26908.5 Isoelectric Point: 7.9125 |
Chromosome | Chromosome/Scaffold: 0105429 Start: 1539 End: 2397 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 2 | 133 | 6.20005e-41 |
IHVFSSVPRHLNFIDHTSDIGWKESQRVQPIIVDAGIYLAGRNQFFQATEKRDTPDGSPWVILNRRFIEYCVFGWDNLPRTLLMYFTNVMLPLEGYFHSV ACNSDFRNFTVNDDLRYMVWDDPPQMEPHFLN |
Full Sequence |
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Protein Sequence Length: 229 Download |
LIHVFSSVPR HLNFIDHTSD IGWKESQRVQ PIIVDAGIYL AGRNQFFQAT EKRDTPDGSP 60 WVILNRRFIE YCVFGWDNLP RTLLMYFTNV MLPLEGYFHS VACNSDFRNF TVNDDLRYMV 120 WDDPPQMEPH FLNVTHYDEL VGSGVPFARK FKENEPLLDK IDDKILRRWY HRPVPGAWCT 180 GRKRWFSDPC SQWSNVNIVR PGPQAEKFRK YINQIFEESK SSNNSCKQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-22 | 1 | 122 | 127 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-79 | 1 | 227 | 234 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN26262.1 | 0 | 26 | 228 | 18 | 226 | unknown [Zea mays] |
DDBJ | BAB40033.1 | 0 | 1 | 228 | 169 | 402 | putative xylosyltransferase I [Oryza sativa Japonica Group] |
GenBank | EEC78537.1 | 0 | 1 | 228 | 192 | 430 | hypothetical protein OsI_18492 [Oryza sativa Indica Group] |
RefSeq | NP_001152461.1 | 0 | 1 | 228 | 169 | 402 | xylosyltransferase 1 [Zea mays] |
RefSeq | XP_002457471.1 | 0 | 1 | 228 | 169 | 402 | hypothetical protein SORBIDRAFT_03g007750 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG870590 | 211 | 25 | 229 | 0 |
CK080564 | 221 | 15 | 229 | 0 |
GO878880 | 219 | 17 | 229 | 0 |
GO881280 | 219 | 17 | 229 | 0 |
GO869956 | 213 | 23 | 229 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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