| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00001194m |
| Family | GT20 |
| Protein Properties | Length: 801 Molecular Weight: 88573.7 Isoelectric Point: 5.9115 |
| Chromosome | Chromosome/Scaffold: 010572 Start: 6877 End: 11542 |
| Description | trehalose-phosphatase/synthase 9 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT20 | 68 | 477 | 0 |
| PVFLTAALGRDSGGFCDEYLWPMLHYLLPVAPSSGGGLRFNEELYGAYLDANSQFADRVFDLLNTDEDLLFIHGYQLWPLPTILRHRSPRARIGFFLHSP FPALEVFGAIPVREDLLRALLNADLVGFHTYNYARHFLSSCSSLLGIANQCYGGCTTIDYFGRAVLVKILSIGIDMGHLREVLASPEAAATAQDITTKYG GRQLLLAWGGADLFMGSGVSLLAMEKLLESRTELRGQAVLVQINDPRRIPGREMDAVRAEVLEIRDRINARFGEPGYSPIVIIDGPLSVYEMVAYFTSAG ICIITAGRDGPSRIPFIYTLCREEGPLAIGLPDAPRESAIVMSEFVGCLPSLFGAILVKQWTVDGVAEAISSALMLSGSTRRMHQEKRFKYVESHDTTYW AWSLDQDLRR | |||
| Full Sequence |
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| Protein Sequence Length: 801 Download |
| MALPSLRGDG SATPEEAAAA PRRIVVTHYL PLRAEPNPEA AHGFDFSLDA GAIALHLSCG 60 LPSPVVFPVF LTAALGRDSG GFCDEYLWPM LHYLLPVAPS SGGGLRFNEE LYGAYLDANS 120 QFADRVFDLL NTDEDLLFIH GYQLWPLPTI LRHRSPRARI GFFLHSPFPA LEVFGAIPVR 180 EDLLRALLNA DLVGFHTYNY ARHFLSSCSS LLGIANQCYG GCTTIDYFGR AVLVKILSIG 240 IDMGHLREVL ASPEAAATAQ DITTKYGGRQ LLLAWGGADL FMGSGVSLLA MEKLLESRTE 300 LRGQAVLVQI NDPRRIPGRE MDAVRAEVLE IRDRINARFG EPGYSPIVII DGPLSVYEMV 360 AYFTSAGICI ITAGRDGPSR IPFIYTLCRE EGPLAIGLPD APRESAIVMS EFVGCLPSLF 420 GAILVKQWTV DGVAEAISSA LMLSGSTRRM HQEKRFKYVE SHDTTYWAWS LDQDLRRATM 480 GHASMNILSV GLHMNFRVVI PRPNCKKLLP VHISPSYQRA SRRLILLDYE GTLMQQEVNT 540 RPGAPSQELI HTLNQLCSDP KNTVFVVSGR RSCDLAIWFE ACEKLGISRG VQKYICLEPG 600 PFRARSLHFL VQNVGPFTTP RRRRNSLWKL ANSMVPFHSK RLVGDVMKHY TNATDGSYIE 660 FQAKAVIWRY EEVDPEFGLC QAKALQDHLQ NMLEDEAVYV KSGYRAVEVV PQVLSKGAAV 720 QGLIENIMAD GITPDFILCI GDDEFDRDMF EAVSSPRSNP LFLDAAEIFA CTVGNRPCLA 780 EYYLEDAADV ETMLQGLTEL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 6.0e-103 | 68 | 797 | 769 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PRK14501 | PRK14501 | 3.0e-109 | 68 | 799 | 738 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 7.0e-114 | 60 | 476 | 418 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| pfam00982 | Glyco_transf_20 | 2.0e-120 | 24 | 477 | 487 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PLN02205 | PLN02205 | 0 | 24 | 800 | 815 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY87814.1 | 0 | 10 | 799 | 38 | 828 | hypothetical protein OsI_09233 [Oryza sativa Indica Group] |
| GenBank | EAZ07161.1 | 0 | 3 | 799 | 1 | 805 | hypothetical protein OsI_29408 [Oryza sativa Indica Group] |
| RefSeq | NP_001061925.1 | 0 | 3 | 799 | 1 | 805 | Os08g0445700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444439.1 | 0 | 1 | 799 | 1 | 801 | hypothetical protein SORBIDRAFT_07g021920 [Sorghum bicolor] |
| RefSeq | XP_002452959.1 | 0 | 22 | 797 | 50 | 827 | hypothetical protein SORBIDRAFT_04g035560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 2e-35 | 82 | 477 | 79 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 2e-35 | 82 | 477 | 79 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 2e-35 | 82 | 477 | 79 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 2e-35 | 82 | 477 | 79 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 2e-35 | 82 | 477 | 80 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777775 | 737 | 68 | 797 | 0 |
| HO779327 | 482 | 68 | 544 | 0 |
| HO779327 | 254 | 544 | 797 | 0 |
| HO797286 | 494 | 312 | 797 | 0 |
| HO795511 | 493 | 309 | 799 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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