| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00001245m |
| Family | CE6 |
| Protein Properties | Length: 267 Molecular Weight: 28598.1 Isoelectric Point: 10.0983 |
| Chromosome | Chromosome/Scaffold: 0107928 Start: 395 End: 1831 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE6 | 94 | 190 | 4.5e-29 |
| GPGMPFANALLRSGRAGAPVLGLVPCAVGGTRMADWARGTDLYAQMLRRARVAVETGGRIGALLWYQGESDTLRWSDANEYGRRMGMLVRDIRADLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 267 Download |
| MLLLFLLLLL AAASPTPSVL ADVPPSNKVV FILAGQSNMA GRGGVVANRW DGRVPADCAP 60 SPAVLRLTPD LRWEQAREPL HQGIDAANHA VGVGPGMPFA NALLRSGRAG APVLGLVPCA 120 VGGTRMADWA RGTDLYAQML RRARVAVETG GRIGALLWYQ GESDTLRWSD ANEYGRRMGM 180 LVRDIRADLG IPHLLVIQVG LASGLGQYTQ VVREAQKGIK LRNVRFVDAM GLPLQDGHLH 240 LSTQAQVQLG HMLAQSYLNY YGTSRP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 4.0e-35 | 30 | 259 | 271 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP21393.1 | 0 | 27 | 264 | 24 | 257 | unknown protein [Oryza sativa Japonica Group] |
| GenBank | ACF85252.1 | 0 | 19 | 265 | 19 | 264 | unknown [Zea mays] |
| RefSeq | NP_001051956.1 | 0 | 26 | 264 | 16 | 250 | Os03g0857500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001136877.1 | 0 | 39 | 265 | 1 | 226 | hypothetical protein LOC100217031 [Zea mays] |
| RefSeq | XP_002463482.1 | 0 | 19 | 265 | 23 | 268 | hypothetical protein SORBIDRAFT_01g000550 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 17 | 261 | 13 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 17 | 261 | 13 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 17 | 261 | 13 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 17 | 261 | 13 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 4e-23 | 31 | 259 | 5 | 226 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
