| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00001511m |
| Family | GT48 |
| Protein Properties | Length: 422 Molecular Weight: 48548.4 Isoelectric Point: 10.0225 |
| Chromosome | Chromosome/Scaffold: 0104439 Start: 313 End: 2052 |
| Description | glucan synthase-like 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 3 | 278 | 0 |
| VVGVYVFLYGQLYLVLSGLQRALLHDAQTQNIKSLETALASQSFLQLGLLTGLPMVMELGLEKGFRTALSDFILMQLQLASVFFTFSLGTKAHYYGRTIL HGGAKYRPTGRKFVVFHASFTENYQLYSRSHFVKGFELVFLLIVYHIFRRSYVSSVVHVMITYSTWFMAVTWLFTPFLFNPAGFAWQKIVEDWADWNRWM RNQGGIGVQPEKSWESWWNAENAHIRHSVLSSRILEVLLSLRFFIYQYGLVYHLNISQDNKNFLVYLLSWVVIIAI | |||
| Full Sequence |
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| Protein Sequence Length: 422 Download |
| ISVVGVYVFL YGQLYLVLSG LQRALLHDAQ TQNIKSLETA LASQSFLQLG LLTGLPMVME 60 LGLEKGFRTA LSDFILMQLQ LASVFFTFSL GTKAHYYGRT ILHGGAKYRP TGRKFVVFHA 120 SFTENYQLYS RSHFVKGFEL VFLLIVYHIF RRSYVSSVVH VMITYSTWFM AVTWLFTPFL 180 FNPAGFAWQK IVEDWADWNR WMRNQGGIGV QPEKSWESWW NAENAHIRHS VLSSRILEVL 240 LSLRFFIYQY GLVYHLNISQ DNKNFLVYLL SWVVIIAIIG LVKLVNCASR RLSTNHQLIF 300 RVIKLLIFLT VVTSLILLYC LCQLSILDLI ICCLAFIPTG WGLLLIVQVL RPKIEYYAIW 360 EPIQVIAHAY DYGMGSLLFS PIAVLAWMPV ISAIQTRVLF NRAFSRQLQI QPFIVGKTKR 420 R* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 2.0e-47 | 6 | 288 | 321 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17681.1 | 0 | 1 | 420 | 1632 | 2051 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_188075.1 | 0 | 1 | 421 | 1553 | 1973 | ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002267956.1 | 0 | 1 | 420 | 1506 | 1925 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002451859.1 | 0 | 1 | 421 | 123 | 544 | hypothetical protein SORBIDRAFT_04g008830 [Sorghum bicolor] |
| RefSeq | XP_002530134.1 | 0 | 1 | 420 | 1467 | 1886 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
| Transmembrane Domains | ||||
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| Start | End | |||
| 4 | 26 | |||
| 154 | 176 | |||
| 236 | 258 | |||
| 265 | 282 | |||
| 297 | 319 | |||
| 326 | 348 | |||
| 372 | 394 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO876767 | 333 | 21 | 353 | 0 |
| CN127234 | 268 | 134 | 401 | 0 |
| JG902317 | 240 | 1 | 240 | 0 |
| JG937221 | 240 | 163 | 402 | 0 |
| DT651965 | 220 | 203 | 422 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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