Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00001745m |
Family | GT77 |
Protein Properties | Length: 438 Molecular Weight: 48305.7 Isoelectric Point: 7.1274 |
Chromosome | Chromosome/Scaffold: 0101636 Start: 612 End: 3255 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 208 | 403 | 0 |
RHLLIVAMDGKAFQRCLAVHPFCYWFRVAGMDFAGEQKYMKGDYLEMMWRRNRLQQRVLELGYSFLFTDVDILWFRSPFPRLPAGAQVVMSSDFFVGDPA SPNNYPNGGLLYVRSSPAAVAFYEHWQASRARFPGKHEQYVFDMIVKEGVPATIGAAVRFLDTAVFGGFCQHGKDLGKVATMHANCCIGLENKLFD |
Full Sequence |
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Protein Sequence Length: 438 Download |
MIRPQAGLLL RSLGAGGGAR PGAMRSATSL LLGAALATAF FLLYTSLCRD IGGSPGTPPP 60 RWERREAGKA VETGAAAVAD REVRDLNPKQ REHVAREEER RKVEVMHGDG DGGGGHGARK 120 DEENGRDSEQ EQPQQIVMPS ATSTPTEQQH QQETPSEDDL ADLLRRAATS DKTVLMTAIN 180 EAWAAPGSFL DLFLESFRHG EGTGDLPRHL LIVAMDGKAF QRCLAVHPFC YWFRVAGMDF 240 AGEQKYMKGD YLEMMWRRNR LQQRVLELGY SFLFTDVDIL WFRSPFPRLP AGAQVVMSSD 300 FFVGDPASPN NYPNGGLLYV RSSPAAVAFY EHWQASRARF PGKHEQYVFD MIVKEGVPAT 360 IGAAVRFLDT AVFGGFCQHG KDLGKVATMH ANCCIGLENK LFDLKNVLDD WKAYRARVAA 420 GDDARGFSWR VPGRCIH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 3.0e-69 | 208 | 404 | 205 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27759.1 | 0 | 24 | 437 | 1 | 407 | unknown [Zea mays] |
GenBank | ACN32140.1 | 0 | 23 | 437 | 36 | 443 | unknown [Zea mays] |
GenBank | ACR34176.1 | 0 | 147 | 437 | 17 | 303 | unknown [Zea mays] |
RefSeq | NP_001059404.1 | 0 | 25 | 437 | 3 | 406 | Os07g0294800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150863.1 | 0 | 24 | 437 | 1 | 412 | regulatory protein [Zea mays] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL856915 | 229 | 210 | 438 | 0 |
FL835930 | 202 | 158 | 359 | 0 |
FL853264 | 215 | 224 | 438 | 0 |
HX200573 | 240 | 159 | 398 | 0 |
FL835930 | 43 | 359 | 401 | 0.0000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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