Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00001805m |
Family | CE10 |
Protein Properties | Length: 466 Molecular Weight: 50876.1 Isoelectric Point: 8.6939 |
Chromosome | Chromosome/Scaffold: 010741 Start: 8751 End: 10562 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 35 | 304 | 2.20004e-42 |
ETTPAGFDAATGVNSKDVVIDATTGATVRLYLPPLEGAAATKLPFLVFFHGGYFIVGSAAEPMYHRYVKSLVARARVVAVSVEYRLAPEHPLPAAYDDSW AALKWAVSRADPWLSDHGDLSRVFLVGVSTGDNIVHNMAVAVGVSGLPTIEPARLEGVIELHPSFSSEHKMDVEDEEFWRANNNRWKVIFPGATGGADDP RINPTVDGAPSLMKLAGQRLLVCMASEDPRAPRARDYCDAVRASGWRGEAEWFESEGEGHGFFVLNPSTP |
Full Sequence |
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Protein Sequence Length: 466 Download |
MDSGSTAIAF DYSSFRLTWT IHPGRPRQPC PHRMETTPAG FDAATGVNSK DVVIDATTGA 60 TVRLYLPPLE GAAATKLPFL VFFHGGYFIV GSAAEPMYHR YVKSLVARAR VVAVSVEYRL 120 APEHPLPAAY DDSWAALKWA VSRADPWLSD HGDLSRVFLV GVSTGDNIVH NMAVAVGVSG 180 LPTIEPARLE GVIELHPSFS SEHKMDVEDE EFWRANNNRW KVIFPGATGG ADDPRINPTV 240 DGAPSLMKLA GQRLLVCMAS EDPRAPRARD YCDAVRASGW RGEAEWFESE GEGHGFFVLN 300 PSTPFSDWLS RTLSSQQLRQ VLGLWFQFLA ASSRRWRWRR GGISPLGLFL APLVLRSGAS 360 GEPVVVRSWL LVLRKMGGWI RLEVSVPAVG GSGEFRSKIK SARGVVPADG LLGDGPISFA 420 GMSVYCSFLQ SFRAMEYSSI WIWAVAVGSS VPRRRERCSL GLQGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.004 | 76 | 181 | 120 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 0.003 | 76 | 170 | 109 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
PRK10162 | PRK10162 | 0.0005 | 49 | 168 | 122 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 3.0e-21 | 15 | 301 | 291 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-38 | 80 | 297 | 224 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28069.1 | 0 | 1 | 303 | 1 | 298 | unknown [Zea mays] |
GenBank | EAZ09365.1 | 0 | 1 | 298 | 1 | 297 | hypothetical protein OsI_31638 [Oryza sativa Indica Group] |
RefSeq | NP_001063360.1 | 0 | 1 | 298 | 1 | 297 | Os09g0455900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462487.1 | 0 | 1 | 298 | 1 | 305 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
RefSeq | XP_002462487.1 | 0 | 14 | 303 | 328 | 617 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 3e-30 | 31 | 299 | 35 | 322 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 2o7r_A | 3e-30 | 31 | 299 | 35 | 322 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 3e-29 | 37 | 313 | 52 | 351 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 3e-29 | 37 | 313 | 52 | 351 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 3e-29 | 37 | 313 | 52 | 351 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL780299 | 246 | 47 | 290 | 0 |
EE153671 | 238 | 1 | 238 | 0 |
FL799828 | 227 | 1 | 225 | 0 |
CT847751 | 299 | 1 | 293 | 0 |
FL804644 | 164 | 140 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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