Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00001867m |
Family | GH27 |
Protein Properties | Length: 392 Molecular Weight: 42620.3 Isoelectric Point: 8.1904 |
Chromosome | Chromosome/Scaffold: 010241 Start: 7247 End: 10550 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 138 | 235 | 2.4e-32 |
RMPGSLGHEDTDAKTFASWGVDYLKYDNCYRDGTPETVRFSRMSRALKSSGRSIFYSLCEWGYMEVAKWGGASGNSWRTTGDINDTWTRMLDNIDRND |
Full Sequence |
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Protein Sequence Length: 392 Download |
MAPPTAVLLL LMVTAGCLAD ARPRPATDGA RRTLLANGLG LTPQMGWNSW NHFQCDINET 60 VVRSTADALV ATGLAKAGYT YVNLDDCWAD YQRTKEGHMV ANPKTFPSGI KALADYVHSK 120 GLKLGLYSSA GTRTCSDRMP GSLGHEDTDA KTFASWGVDY LKYDNCYRDG TPETVRFSRM 180 SRALKSSGRS IFYSLCEWGY MEVAKWGGAS GNSWRTTGDI NDTWTRMLDN IDRNDAYAQY 240 AKPGGWNDPD MLEVGNGGMT YDEYAPLVIG CDVTGISKEA LGILANAEVI AINQDRLGIQ 300 GKKVTKYGND LEVWGGRLTR HRKAVLLLNR GATRSAPVTA AWPDVGIRPG VAVEARDVWK 360 HETLPGKFTG SLTAAVEPHS CKLFVLTPVP R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 5.0e-16 | 43 | 298 | 355 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 3.0e-26 | 40 | 199 | 205 | + Melibiase. | ||
PLN02229 | PLN02229 | 8.0e-166 | 32 | 389 | 371 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 12 | 388 | 388 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 27 | 389 | 374 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG38718.1 | 0 | 23 | 390 | 39 | 427 | alpha-galactosidase precursor [Zea mays] |
GenBank | EEE67099.1 | 0 | 28 | 391 | 39 | 403 | hypothetical protein OsJ_24103 [Oryza sativa Japonica Group] |
RefSeq | NP_001059549.1 | 0 | 28 | 391 | 39 | 384 | Os07g0452100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130466.1 | 0 | 45 | 390 | 1 | 357 | hypothetical protein LOC100191564 [Zea mays] |
RefSeq | XP_002461921.1 | 0 | 23 | 391 | 45 | 424 | hypothetical protein SORBIDRAFT_02g010650 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 35 | 388 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 37 | 384 | 3 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 35 | 388 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 35 | 388 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 35 | 341 | 1 | 339 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |