Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00002244m |
Family | GH17 |
Protein Properties | Length: 302 Molecular Weight: 31591.9 Isoelectric Point: 4.8251 |
Chromosome | Chromosome/Scaffold: 0103303 Start: 2593 End: 3498 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 300 | 0 |
MVADDLPAPDEVVQLYKSSGIKNMRIYAPDSRVMEALRGSGIGLILGVVNQDIGNLAGCPSCAATWVQTNVQPYYPAVNILYIAVGNEVQGGAAQSILPA MRNLAAALAAAGLAGIKVSTCVRLDVVANSFPPSSGVFAQPYMADIARYLAAAGAPLLANVYPYFAYRGSPGDISLSYALFLPGTTVRDGGNGLIYTNLF DAMVDAVHAALEKAGAADVRVVVSESGWPSAGGAAGSVENAQTYNQNLIDRAAQGTPKRPGALETFVFAMFNENQKPGEATEQNFGLFYPNKSPVYPLTF |
Full Sequence |
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Protein Sequence Length: 302 Download |
MVADDLPAPD EVVQLYKSSG IKNMRIYAPD SRVMEALRGS GIGLILGVVN QDIGNLAGCP 60 SCAATWVQTN VQPYYPAVNI LYIAVGNEVQ GGAAQSILPA MRNLAAALAA AGLAGIKVST 120 CVRLDVVANS FPPSSGVFAQ PYMADIARYL AAAGAPLLAN VYPYFAYRGS PGDISLSYAL 180 FLPGTTVRDG GNGLIYTNLF DAMVDAVHAA LEKAGAADVR VVVSESGWPS AGGAAGSVEN 240 AQTYNQNLID RAAQGTPKRP GALETFVFAM FNENQKPGEA TEQNFGLFYP NKSPVYPLTF 300 R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 6.0e-133 | 1 | 300 | 306 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY88778.1 | 0 | 1 | 300 | 35 | 334 | beta-1,3-glucanase [Triticum aestivum] |
GenBank | AAY96422.1 | 0 | 1 | 300 | 35 | 334 | beta-1,3-glucanase [Triticum aestivum] |
Swiss-Prot | Q02437 | 0 | 1 | 300 | 7 | 308 | E13D_HORVU RecName: Full=Glucan endo-1,3-beta-glucosidase GIV; AltName: Full=(1- |
RefSeq | XP_002459077.1 | 0 | 1 | 300 | 36 | 336 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
RefSeq | XP_002459079.1 | 0 | 2 | 301 | 38 | 340 | hypothetical protein SORBIDRAFT_03g045510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 1 | 300 | 7 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 300 | 7 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 1 | 300 | 7 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 1 | 300 | 8 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 1 | 300 | 8 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR739897 | 299 | 1 | 298 | 0 |
DR739798 | 304 | 1 | 300 | 0 |
HX143290 | 240 | 63 | 302 | 0 |
BU103698 | 301 | 3 | 302 | 0 |
FL764193 | 257 | 11 | 262 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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