y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00002442m |
Family | GT43 |
Protein Properties | Length: 502 Molecular Weight: 55141.6 Isoelectric Point: 8.643 |
Chromosome | Chromosome/Scaffold: 0103759 Start: 1 End: 3369 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 188 | 426 | 0 |
LLHSLRNVPYPLTWIVVEAGDTTNATASLLARSGLTFVHIPFPDRMPHVWADRHATENRMRLHALRAIRERKMDGVVVFADDSNVHSMELFDEVQKVQWM GAVSVGILAHTGAADQPRLSKEDKQNMPLPVQGPACNSSGHLAGWHTFNSLPFSGKTATVVGEAAPVLPRGLEWAGFVLNSRMLWKEAEGKPDWVKDLDA VGENGEEIENPLTLLNDPSSVEPLGNCGKKVLLWWLRVE |
Full Sequence |
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Protein Sequence Length: 502 Download |
AAADGGGAGA RAPASSTFWF LLHALCCLIS LFLGFRFSRL LFFLLFSTTA LYHSTTSSSA 60 AAVLRATTTT TTTTTTTTTT TNTFTLSFAA ANPPPSNPAN RTALEAAAAA DKGATSGNPQ 120 SHVVVGRHGI RIRPWPHPDP VEVMRAHRIM ERVQEEQRRW YGVKEPRQVL VVTPTYSRAF 180 QALHLTGLLH SLRNVPYPLT WIVVEAGDTT NATASLLARS GLTFVHIPFP DRMPHVWADR 240 HATENRMRLH ALRAIRERKM DGVVVFADDS NVHSMELFDE VQKVQWMGAV SVGILAHTGA 300 ADQPRLSKED KQNMPLPVQG PACNSSGHLA GWHTFNSLPF SGKTATVVGE AAPVLPRGLE 360 WAGFVLNSRM LWKEAEGKPD WVKDLDAVGE NGEEIENPLT LLNDPSSVEP LGNCGKKVLL 420 WWLRVEARAD SKFPQGWVIE PPLDIVVPAK RTPWPETTTE LPSELLDDKQ DQEDRRLSRA 480 NKSSRPRSTT KRKGDLQGQE N* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02458 | PLN02458 | 2.0e-17 | 140 | 384 | 249 | + transferase, transferring glycosyl groups | ||
pfam03360 | Glyco_transf_43 | 3.0e-43 | 188 | 427 | 247 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 1.0e-59 | 169 | 427 | 263 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD45607.1 | 0 | 11 | 473 | 45 | 502 | putative UDP-glucuronyltransferase-l [Oryza sativa Japonica Group] |
EMBL | CAI93187.1 | 0 | 11 | 497 | 43 | 525 | glycosyltransferase [Hordeum vulgare] |
EMBL | CAI93190.1 | 0 | 11 | 501 | 42 | 531 | glycosyltransferase [Saccharum officinarum] |
EMBL | CAI93192.1 | 0 | 5 | 497 | 37 | 525 | glycosyltransferase [Triticum aestivum] |
GenBank | EAZ02156.1 | 0 | 11 | 473 | 45 | 502 | hypothetical protein OsI_24245 [Oryza sativa Indica Group] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.000000000000009 | 169 | 426 | 5 | 234 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1v84_A | 0.000000000000009 | 169 | 426 | 5 | 234 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1v83_B | 0.000000000000009 | 169 | 426 | 5 | 234 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1v83_A | 0.000000000000009 | 169 | 426 | 5 | 234 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1v82_B | 0.000000000000009 | 169 | 426 | 5 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |