| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002469m |
| Family | GH9 |
| Protein Properties | Length: 479 Molecular Weight: 53202.2 Isoelectric Point: 5.8887 |
| Chromosome | Chromosome/Scaffold: 0103157 Start: 118 End: 3338 |
| Description | glycosyl hydrolase 9B7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 3 | 385 | 0 |
| GKLENNQIPWRGDSALTDGKEAGLDLSKGMYDAGDHMKFTFPMAFTATVLAWSVLEYGDQMSAAKQLDPALDALKWITDFLIAAHPSDNVLYIQVGDPDL DHNCWERPETMTEKRPLTQINKKSPGSDVAAEAAAAMAAASMVFKSSDTTYSDVLLQHAQKLFTFADTYRGLSSESYPKLQDFYNSTGYVDELLWAASWL YHATGDQTYLSYVTVQNGKTYAEWGRPTWFSWDDKNPGTQVLLSRLNFFGSKQISNAENEGLKSYRDTAEAVICGLIPDSPQATASRTGGGLIWISGWNS LQHATNSAFLALVYSDYMLSTRTAEVQCSGKYYSPTDIRNFAASQANYILGDNPMKLSYLVGYGSNYPQQVHHRGASIPQMQK | |||
| Full Sequence |
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| Protein Sequence Length: 479 Download |
| EAGKLENNQI PWRGDSALTD GKEAGLDLSK GMYDAGDHMK FTFPMAFTAT VLAWSVLEYG 60 DQMSAAKQLD PALDALKWIT DFLIAAHPSD NVLYIQVGDP DLDHNCWERP ETMTEKRPLT 120 QINKKSPGSD VAAEAAAAMA AASMVFKSSD TTYSDVLLQH AQKLFTFADT YRGLSSESYP 180 KLQDFYNSTG YVDELLWAAS WLYHATGDQT YLSYVTVQNG KTYAEWGRPT WFSWDDKNPG 240 TQVLLSRLNF FGSKQISNAE NEGLKSYRDT AEAVICGLIP DSPQATASRT GGGLIWISGW 300 NSLQHATNSA FLALVYSDYM LSTRTAEVQC SGKYYSPTDI RNFAASQANY ILGDNPMKLS 360 YLVGYGSNYP QQVHHRGASI PQMQKQAAKD LSISIHPIQT QMLQWAPWWV VHSRMTLSST 420 LGIMLYRRSP ALTTVALLSV CFPVWSPLPL WHSHSPRLLE ASHIYLLAMA LIDMEVCM* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 2.0e-125 | 2 | 381 | 385 | + endoglucanase | ||
| PLN02171 | PLN02171 | 6.0e-127 | 2 | 380 | 382 | + endoglucanase | ||
| PLN00119 | PLN00119 | 5.0e-131 | 2 | 385 | 386 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-146 | 2 | 379 | 385 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 2 | 390 | 389 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84946.1 | 0 | 1 | 389 | 73 | 461 | hypothetical protein OsI_32163 [Oryza sativa Indica Group] |
| GenBank | EEE70113.1 | 0 | 1 | 389 | 73 | 461 | hypothetical protein OsJ_30126 [Oryza sativa Japonica Group] |
| RefSeq | NP_001063771.1 | 0 | 1 | 389 | 73 | 461 | Os09g0533900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145749.1 | 0 | 1 | 389 | 71 | 459 | hypothetical protein LOC100279256 [Zea mays] |
| RefSeq | XP_002462729.1 | 0 | 1 | 389 | 70 | 458 | hypothetical protein SORBIDRAFT_02g030990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 1 | 381 | 20 | 366 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ksc_A | 0 | 1 | 381 | 20 | 366 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ks8_A | 0 | 1 | 381 | 20 | 366 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 1 | 378 | 21 | 380 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 1 | 378 | 21 | 380 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EH188586 | 318 | 72 | 389 | 0 |
| FL870300 | 271 | 23 | 293 | 0 |
| GO842570 | 316 | 95 | 406 | 0 |
| CX103225 | 293 | 7 | 299 | 0 |
| EH188586 | 81 | 382 | 460 | 0.018 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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