Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00002587m |
Family | GH9 |
Protein Properties | Length: 535 Molecular Weight: 58178.9 Isoelectric Point: 6.0322 |
Chromosome | Chromosome/Scaffold: 034579 Start: 1789 End: 5598 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 507 | 0 |
DYGDALSKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTLLSWGVLEYGAGVSAAGELAHALQAIKWGTDYF VKAHTAPTELWAQVGDGDSDHYCWQRPEDMTTSRRAYKVDADHPGSEVAAETAAAMAAASLVFRRAGDAHYAHLLLHHAQQLFEFADKFRGRYDESVEVV KSYYPSSSGYQDELLWAALWLHRATGRRDYLDYALANADDFGGTGWAVSEFSWDIKYAGLQVLASELLVEAKERRLRLSPEQRAVVEQLRSKAEYYVCSC MNQNPGGAEHNAGRTPAGLLFIRPWNNLQYASGAAFLLTVYSDVLSALGEPLRCGGAGGEEGGAAGDAADVLAFAKSQADYILGSNPMRTSYLVGYGAAY PRRVHHRAASSASFRHDRDFIGCLQGFDSWYSARRENPHDLVGAVVGGPNGEDVFTDHRGKYMQTEACTYNTAPMVGVF |
Full Sequence |
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Protein Sequence Length: 535 Download |
MSDVSGRFVV AAAVVAVSLA AAAASAAHDY GDALSKSLLY FEAQRSGRLP YNQRVRWRGH 60 SGLTDGLEQG VDLVGGYYDA GDHVKFGLPM AFTVTLLSWG VLEYGAGVSA AGELAHALQA 120 IKWGTDYFVK AHTAPTELWA QVGDGDSDHY CWQRPEDMTT SRRAYKVDAD HPGSEVAAET 180 AAAMAAASLV FRRAGDAHYA HLLLHHAQQL FEFADKFRGR YDESVEVVKS YYPSSSGYQD 240 ELLWAALWLH RATGRRDYLD YALANADDFG GTGWAVSEFS WDIKYAGLQV LASELLVEAK 300 ERRLRLSPEQ RAVVEQLRSK AEYYVCSCMN QNPGGAEHNA GRTPAGLLFI RPWNNLQYAS 360 GAAFLLTVYS DVLSALGEPL RCGGAGGEEG GAAGDAADVL AFAKSQADYI LGSNPMRTSY 420 LVGYGAAYPR RVHHRAASSA SFRHDRDFIG CLQGFDSWYS ARRENPHDLV GAVVGGPNGE 480 DVFTDHRGKY MQTEACTYNT APMVGVFSKL MQLEGQQPRR RRPEEAGPAP AEDL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 7.0e-167 | 29 | 510 | 482 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-169 | 29 | 508 | 482 | + Glycosyl hydrolase family 9. | ||
PLN02420 | PLN02420 | 0 | 29 | 513 | 485 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 28 | 510 | 483 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 29 | 513 | 485 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001045907.1 | 0 | 1 | 533 | 1 | 532 | Os02g0151300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002321149.1 | 0 | 7 | 517 | 19 | 513 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002453306.1 | 0 | 28 | 534 | 33 | 535 | hypothetical protein SORBIDRAFT_04g003690 [Sorghum bicolor] |
RefSeq | XP_002454315.1 | 0 | 27 | 530 | 64 | 552 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
RefSeq | XP_002525326.1 | 0 | 13 | 519 | 29 | 519 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 27 | 513 | 2 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ksc_A | 0 | 27 | 513 | 2 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ks8_A | 0 | 27 | 513 | 2 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 24 | 516 | 20 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 27 | 528 | 3 | 458 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |