Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00002681m |
Family | AA1 |
Protein Properties | Length: 306 Molecular Weight: 32748 Isoelectric Point: 7.6924 |
Chromosome | Chromosome/Scaffold: 0339677 Start: 1 End: 918 |
Description | laccase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 304 | 0 |
LRLINSALNDELFFGIANHTLTVVEADASYVKPFTVQTLVISPGQAMNVLLTTAPSPASPAYAMAISPYTNTQGTFDNTTAAAVLEYAPMPAAAARSLPL PALPLYNDTGAVTNFSRNFRSLASAQYPAAVPLAVDRHLLFTVGLGTDPCPSNQTCQGPNGTKFAASINNNSFFRPRTALLEAHYQRRYAGVLLANFPTT PPRPFNYTGTPPNTTFVQHGTRVVPLKFNTSVELVLQGTSIQGAESHPLHLHGYNFFVVGQGFGNFDPVNDPPKYNLADPVERNTISVPTAGWVALRFLA DNPG |
Full Sequence |
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Protein Sequence Length: 306 Download |
LRLINSALND ELFFGIANHT LTVVEADASY VKPFTVQTLV ISPGQAMNVL LTTAPSPASP 60 AYAMAISPYT NTQGTFDNTT AAAVLEYAPM PAAAARSLPL PALPLYNDTG AVTNFSRNFR 120 SLASAQYPAA VPLAVDRHLL FTVGLGTDPC PSNQTCQGPN GTKFAASINN NSFFRPRTAL 180 LEAHYQRRYA GVLLANFPTT PPRPFNYTGT PPNTTFVQHG TRVVPLKFNT SVELVLQGTS 240 IQGAESHPLH LHGYNFFVVG QGFGNFDPVN DPPKYNLADP VERNTISVPT AGWVALRFLA 300 DNPGN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 1.0e-17 | 197 | 304 | 114 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam00394 | Cu-oxidase | 2.0e-18 | 1 | 53 | 53 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02604 | PLN02604 | 1.0e-27 | 12 | 304 | 302 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-29 | 6 | 304 | 309 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 2.0e-119 | 1 | 304 | 305 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG47007.1 | 0 | 1 | 304 | 236 | 540 | L-ascorbate oxidase precursor [Zea mays] |
RefSeq | NP_001055744.1 | 0 | 1 | 304 | 189 | 497 | Os05g0458300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105921.1 | 0 | 10 | 304 | 247 | 546 | putative laccase [Zea mays] |
Swiss-Prot | Q0DHL5 | 0 | 1 | 304 | 189 | 497 | LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11 |
RefSeq | XP_002456622.1 | 0 | 1 | 304 | 235 | 537 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1e-26 | 1 | 304 | 216 | 501 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asq_A | 1e-26 | 1 | 304 | 216 | 501 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_B | 1e-26 | 1 | 304 | 216 | 501 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1asp_A | 1e-26 | 1 | 304 | 216 | 501 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1aso_B | 1e-26 | 1 | 304 | 216 | 501 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL865901 | 237 | 16 | 252 | 0 |
HX183449 | 236 | 1 | 235 | 0 |
GR366996 | 257 | 36 | 292 | 0 |
BI958400 | 198 | 106 | 303 | 0 |
DN145214 | 206 | 47 | 252 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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