CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00002681m
FamilyAA1
Protein PropertiesLength: 306 Molecular Weight: 32748 Isoelectric Point: 7.6924
ChromosomeChromosome/Scaffold: 0339677 Start: 1 End: 918
Descriptionlaccase 2
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA113040
  LRLINSALNDELFFGIANHTLTVVEADASYVKPFTVQTLVISPGQAMNVLLTTAPSPASPAYAMAISPYTNTQGTFDNTTAAAVLEYAPMPAAAARSLPL
  PALPLYNDTGAVTNFSRNFRSLASAQYPAAVPLAVDRHLLFTVGLGTDPCPSNQTCQGPNGTKFAASINNNSFFRPRTALLEAHYQRRYAGVLLANFPTT
  PPRPFNYTGTPPNTTFVQHGTRVVPLKFNTSVELVLQGTSIQGAESHPLHLHGYNFFVVGQGFGNFDPVNDPPKYNLADPVERNTISVPTAGWVALRFLA
  DNPG
Full Sequence
Protein Sequence     Length: 306     Download
LRLINSALND ELFFGIANHT LTVVEADASY VKPFTVQTLV ISPGQAMNVL LTTAPSPASP    60
AYAMAISPYT NTQGTFDNTT AAAVLEYAPM PAAAARSLPL PALPLYNDTG AVTNFSRNFR    120
SLASAQYPAA VPLAVDRHLL FTVGLGTDPC PSNQTCQGPN GTKFAASINN NSFFRPRTAL    180
LEAHYQRRYA GVLLANFPTT PPRPFNYTGT PPNTTFVQHG TRVVPLKFNT SVELVLQGTS    240
IQGAESHPLH LHGYNFFVVG QGFGNFDPVN DPPKYNLADP VERNTISVPT AGWVALRFLA    300
DNPGN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam07731Cu-oxidase_21.0e-17197304114+
pfam00394Cu-oxidase2.0e-1815353+
PLN02604PLN026041.0e-2712304302+
TIGR03388ascorbase3.0e-296304309+
TIGR03389laccase2.0e-1191304305+
Gene Ontology
GO TermDescription
GO:0005507copper ion binding
GO:0016491oxidoreductase activity
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG47007.101304236540L-ascorbate oxidase precursor [Zea mays]
RefSeqNP_001055744.101304189497Os05g0458300 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001105921.1010304247546putative laccase [Zea mays]
Swiss-ProtQ0DHL501304189497LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11
RefSeqXP_002456622.101304235537hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1asq_B1e-261304216501A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB1asq_A1e-261304216501A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB1asp_B1e-261304216501A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB1asp_A1e-261304216501A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB1aso_B1e-261304216501A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FL865901237162520
HX18344923612350
GR366996257362920
BI9584001981063030
DN145214206472520
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_009_00935.1
Brassica rapaBra005140.269.564Bra005140.269.564
Carica papayaevm.model.supercontig_19.218evm.model.supercontig_139.15.299.495evm.model.supercontig_169.17.281.510evm.model.supercontig_169.17.281.510evm.model.supercontig_139.15.299.495
Citrus sinensisorange1.1g047904morange1.1g008592m.269.548orange1.1g008592m.269.548
Glycine maxGlyma13g41310.1
Gossypium raimondiiGorai.009G103600.1.261.496Gorai.009G103600.1.261.496
Linum usitatissimumLus10013800Lus10004975
Malus domesticaMDP0000127409
Panicum virgatumPavirv00032912mPavirv00055389m
Phaseolus vulgarisPhvul.008G100600.1.286.504Phvul.008G100600.1.286.504
Picea abiesMA_502044g0010MA_9147880g0010MA_115430g0010MA_10430876g0010MA_10053838g0010
MA_9198822g0010MA_14240g0010
Prunus persicappa018465mppa017222mppa022262m
Sorghum bicolorSb03g028920.1
Vitis viniferaGSVIVT01034140001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny