| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002787m |
| Family | AA2 |
| Protein Properties | Length: 494 Molecular Weight: 49943.8 Isoelectric Point: 9.2376 |
| Chromosome | Chromosome/Scaffold: 034080 Start: 2642 End: 6041 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA2 | 230 | 476 | 0 |
| GKLLRLVFHDCFVEGCDASVLIQGNGTERTDPANLSLGGFNVIDAAKRLLEVVCPATVSCSDIIVLAARDAVVFTGGPSVPVPLGRRDGLVSLASNVRRN IIDTGFSVDAMAASFTFKGLTLDDLVTLSGGHTIGSAHCNTFRERFQVANGSMAPVDASMNADYANELIRACAASAGAAVDCDSGSASAFDNRYFANLLA GRGLLRTDAVLVRNATTRAKVEEFARSQEGFFASWAGSYARLTSLGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MGRGLGGAVV CSMLVLPALL ALAASQPATP ALSPAQSAPR PPPAARASSP VPAAPAPRQS 60 SPPVPAVNPS SPPPAAPAGK PSPSPRPAPV PPPPRAAPTP RPLLPPASPV PVPAAPRPAP 120 KPSPPAAPAP GQSQPPATQP PPPSSSLAPR PSPSPATPAP QPPPAPKQSP SPASPKTPPP 180 PQPSSNSTPS TISTLAQLSP SFYAQSCPGV ELAVRDVVRS ASTLDPSIPG KLLRLVFHDC 240 FVEGCDASVL IQGNGTERTD PANLSLGGFN VIDAAKRLLE VVCPATVSCS DIIVLAARDA 300 VVFTGGPSVP VPLGRRDGLV SLASNVRRNI IDTGFSVDAM AASFTFKGLT LDDLVTLSGG 360 HTIGSAHCNT FRERFQVANG SMAPVDASMN ADYANELIRA CAASAGAAVD CDSGSASAFD 420 NRYFANLLAG RGLLRTDAVL VRNATTRAKV EEFARSQEGF FASWAGSYAR LTSLGVKTGA 480 DGEIRRTCSS VNG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 5.0e-5 | 426 | 456 | 31 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 1.0e-21 | 232 | 477 | 259 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 2.0e-55 | 214 | 363 | 151 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-73 | 202 | 492 | 301 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 9.0e-130 | 197 | 491 | 300 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR34255.1 | 0 | 182 | 493 | 167 | 484 | unknown [Zea mays] |
| EMBL | CAE01626.3 | 0 | 243 | 493 | 200 | 513 | OSJNBa0029H02.5 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY94719.1 | 0 | 244 | 493 | 52 | 307 | hypothetical protein OsI_16496 [Oryza sativa Indica Group] |
| RefSeq | NP_001053214.1 | 0 | 197 | 493 | 206 | 508 | Os04g0498700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448121.1 | 0 | 5 | 493 | 1 | 498 | hypothetical protein SORBIDRAFT_06g021550 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qgj_B | 0 | 197 | 492 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qgj_A | 0 | 197 | 492 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1bgp_A | 0 | 198 | 492 | 9 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 1qo4_A | 0 | 197 | 493 | 2 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 1pa2_A | 0 | 197 | 493 | 2 | 305 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
