| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002791m |
| Family | GH5 |
| Protein Properties | Length: 552 Molecular Weight: 58518.1 Isoelectric Point: 8.2782 |
| Chromosome | Chromosome/Scaffold: 034625 Start: 1993 End: 4284 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 41 | 326 | 6.1e-24 |
| VVDASGSRVKLACVNWPSHLEPMLAEGLGQRPVGAIAADVAAMGFNCVRLTWPTFLVTNASYGNLTVAQSFQRLNLTESLAGVRANNPGVADLKLIDALK AVVNSLGEHGVMVILDNHLSKPGWCCSNTDGNGFFGDASSTRTSGSTASPGWPPRSPPRPTSYMQRGAEAVHAANPRVLVILSGLSFDNDLAFLSSRPVN LSFAGKAAFEVHWYSFSNSQEWSSGNANQACARVSAGVTRRALYLLDRGWPVILSEFGVDNRGANANDNRYYGCAAAVVADLDLDW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 552 Download |
| MRLSPPSPPA ASAWLVPVVL AVLAACHQAA APTLSTASRW VVDASGSRVK LACVNWPSHL 60 EPMLAEGLGQ RPVGAIAADV AAMGFNCVRL TWPTFLVTNA SYGNLTVAQS FQRLNLTESL 120 AGVRANNPGV ADLKLIDALK AVVNSLGEHG VMVILDNHLS KPGWCCSNTD GNGFFGDASS 180 TRTSGSTASP GWPPRSPPRP TSYMQRGAEA VHAANPRVLV ILSGLSFDND LAFLSSRPVN 240 LSFAGKAAFE VHWYSFSNSQ EWSSGNANQA CARVSAGVTR RALYLLDRGW PVILSEFGVD 300 NRGANANDNR YYGCAAAVVA DLDLDWALQG SYYLREGVRD HDEAYGVLDG SWSKPRNATA 360 LRRVQALQRP LRGPGLAEAP PYTALFHPVT GMCAVVRRRS PAAQTLELGP CDETEAWEYS 420 AQDQSLALRD SSQLCLRAEG AGRPASLGAS CGDAMARWRL VSDSKLHVAV NATAAASSSA 480 SAAGGGTLCL DVGADGRSVV TNPCRCLSAD NSCDPESQWF KLVNSTRSVA AKPNLLAQLP 540 LKLKNWKIRS F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 1.0e-7 | 75 | 308 | 250 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF79301.1 | 0 | 27 | 551 | 29 | 576 | unknown [Zea mays] |
| GenBank | EEC77495.1 | 0 | 39 | 551 | 36 | 571 | hypothetical protein OsI_16343 [Oryza sativa Indica Group] |
| GenBank | EEE61202.1 | 0 | 39 | 551 | 36 | 571 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
| RefSeq | NP_001130915.1 | 0 | 27 | 551 | 29 | 576 | hypothetical protein LOC100192019 [Zea mays] |
| RefSeq | XP_002446675.1 | 0 | 32 | 551 | 36 | 586 | hypothetical protein SORBIDRAFT_06g020270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.002 | 36 | 299 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.002 | 36 | 299 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.002 | 36 | 299 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.002 | 36 | 299 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
