| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002936m |
| Family | GH5 |
| Protein Properties | Length: 245 Molecular Weight: 26240.9 Isoelectric Point: 6.1143 |
| Chromosome | Chromosome/Scaffold: 034292 Start: 2903 End: 3925 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 19 | 227 | 3.4e-28 |
| VVDPAGRRVKLACVNWPSHLEPVVTEGLGRQPVGAIAGMVVSLGFNCVRLTYPIALATNASLSALTVRQSLLAHGLAETAGGVEVNNPGFLDLTLMDSLK AVVNALGEKDVLVILDNHVSRPGWCCRSDDGNGFFGDRDFDPDVWVDGLGTMATIFADVPNVVGKSLRNELRGPRQNPKDWYTYMQRGAEAVHAANPRAL VIMGGLSYD | |||
| Full Sequence |
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| Protein Sequence Length: 245 Download |
| MRAAARAGAV TLSTSSRWVV DPAGRRVKLA CVNWPSHLEP VVTEGLGRQP VGAIAGMVVS 60 LGFNCVRLTY PIALATNASL SALTVRQSLL AHGLAETAGG VEVNNPGFLD LTLMDSLKAV 120 VNALGEKDVL VILDNHVSRP GWCCRSDDGN GFFGDRDFDP DVWVDGLGTM ATIFADVPNV 180 VGKSLRNELR GPRQNPKDWY TYMQRGAEAV HAANPRALVI MGGLSYDYDL SFLAARQVEV 240 SFAAE |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 6.0e-6 | 58 | 235 | 180 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY86525.1 | 0 | 4 | 244 | 19 | 261 | hypothetical protein OsI_07905 [Oryza sativa Indica Group] |
| GenBank | EAZ23667.1 | 0 | 4 | 244 | 19 | 261 | hypothetical protein OsJ_07369 [Oryza sativa Japonica Group] |
| RefSeq | NP_001047320.1 | 0 | 4 | 244 | 19 | 261 | Os02g0596200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446675.1 | 0 | 11 | 245 | 37 | 271 | hypothetical protein SORBIDRAFT_06g020270 [Sorghum bicolor] |
| RefSeq | XP_002452393.1 | 0 | 7 | 245 | 27 | 265 | hypothetical protein SORBIDRAFT_04g024910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000002 | 7 | 229 | 1 | 209 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000002 | 7 | 229 | 1 | 209 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000002 | 7 | 229 | 1 | 209 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000002 | 7 | 229 | 1 | 209 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EC891965 | 239 | 7 | 245 | 0 |
| EC891964 | 234 | 7 | 240 | 0 |
| EE172555 | 239 | 7 | 245 | 0 |
| EE021181 | 218 | 7 | 224 | 0 |
| EE190368 | 204 | 7 | 210 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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