Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00003029m |
Family | GT37 |
Protein Properties | Length: 544 Molecular Weight: 61853.5 Isoelectric Point: 7.0966 |
Chromosome | Chromosome/Scaffold: 034692 Start: 1982 End: 3814 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 40 | 512 | 0 |
DDVSDDISPSPQIEYDRLLGGLLIEGFDEKSCRSRYQFARYHKSPSIPSPYLIERLRKQELLQKKCGPGTKAYKEASKQLRSGQSQTTNTTDCNYLILTI HAGLGNRMLEITSALLYALLTNRILLVDRYKEIGDLFCEPFPGTSWLVPSDFPLSYGEFTQSSPESYGNMLQNKAAGGNTNRSLAGTRPNYVYLHLDGNY GFHDKLFFCEDDQQFLQGVPWLIIRTDMYFVPSLFLIPGFQDELSRLFPEKDTVFHHLARYLFHPTNNIWYSITKYYRSYMAKAEKRVGIQIRIYETKGI LQRNGPFPHILNQILSCAQNEKLLPEIGMMEGAAAEAQNKGAAAETQNNQTIVVLTTSLSSWYSDQIQKKYEEHPTVDGTTVKVYQPSHEEYQRSRNRKH NMKALAEIYLLSMNDELITSGFSTFGYAAQGLAGLKPWIMFRSENHVTPDPPCGRVMSIEPCFHQAPFYDCKA |
Full Sequence |
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Protein Sequence Length: 544 Download |
MAPLVLAVLM CQHHVLLYVS ELQAAVTDSK PFHLLSDIQD DVSDDISPSP QIEYDRLLGG 60 LLIEGFDEKS CRSRYQFARY HKSPSIPSPY LIERLRKQEL LQKKCGPGTK AYKEASKQLR 120 SGQSQTTNTT DCNYLILTIH AGLGNRMLEI TSALLYALLT NRILLVDRYK EIGDLFCEPF 180 PGTSWLVPSD FPLSYGEFTQ SSPESYGNML QNKAAGGNTN RSLAGTRPNY VYLHLDGNYG 240 FHDKLFFCED DQQFLQGVPW LIIRTDMYFV PSLFLIPGFQ DELSRLFPEK DTVFHHLARY 300 LFHPTNNIWY SITKYYRSYM AKAEKRVGIQ IRIYETKGIL QRNGPFPHIL NQILSCAQNE 360 KLLPEIGMME GAAAEAQNKG AAAETQNNQT IVVLTTSLSS WYSDQIQKKY EEHPTVDGTT 420 VKVYQPSHEE YQRSRNRKHN MKALAEIYLL SMNDELITSG FSTFGYAAQG LAGLKPWIMF 480 RSENHVTPDP PCGRVMSIEP CFHQAPFYDC KAKRDTDLGK VVPYVRHCED VSWGLKIVNE 540 TKL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 1.0e-8 | 135 | 471 | 348 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 55 | 512 | 461 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC74050.1 | 0 | 37 | 542 | 34 | 532 | hypothetical protein OsI_09046 [Oryza sativa Indica Group] |
GenBank | EEE57854.1 | 0 | 37 | 536 | 34 | 526 | hypothetical protein OsJ_08490 [Oryza sativa Japonica Group] |
RefSeq | NP_001048212.1 | 0 | 37 | 542 | 34 | 532 | Os02g0763900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142272.1 | 0 | 46 | 543 | 103 | 604 | hypothetical protein LOC100274441 [Zea mays] |
RefSeq | XP_002452877.1 | 0 | 36 | 543 | 53 | 558 | hypothetical protein SORBIDRAFT_04g034100 [Sorghum bicolor] |