Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00003326m |
Family | GT8 |
Protein Properties | Length: 401 Molecular Weight: 44673.4 Isoelectric Point: 8.8821 |
Chromosome | Chromosome/Scaffold: 0316235 Start: 142 End: 1434 |
Description | galacturonosyltransferase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 80 | 372 | 0 |
CLAMRLLEARLANASAVPDDPPVPPPQFADPSLHHYAVFSDNVLAVSVVVASAARAAAEPSRHVFHVVTAPMYLPAFRVWFARRPPPLGAHVQLLSVSDF PFLNASYSPVLRQIEDGNRDVALLDYLRFYLPEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGAAVNAALHTCFGGFRRYGKYLNFSDPVVRESFSPGAC AWSYGVNVFDLQAWRREQCTEQFHRFMEMNENGTLWDPASVLPAGLMTFYGKTKPLDKSWHVMGLGYNPHIRPEDINGAAVIHFNGNMKPWLD |
Full Sequence |
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Protein Sequence Length: 401 Download |
ALASRLSVST VGALEKEVKA QVKRARSLAG AAKEAFDTQS KIQKLSDTVF AVGQQLLRAR 60 RAGVLNARIA AWSTPKSLHC LAMRLLEARL ANASAVPDDP PVPPPQFADP SLHHYAVFSD 120 NVLAVSVVVA SAARAAAEPS RHVFHVVTAP MYLPAFRVWF ARRPPPLGAH VQLLSVSDFP 180 FLNASYSPVL RQIEDGNRDV ALLDYLRFYL PEMFPALRRV VLLEDDVVVQ RDLAGLWRVD 240 MGAAVNAALH TCFGGFRRYG KYLNFSDPVV RESFSPGACA WSYGVNVFDL QAWRREQCTE 300 QFHRFMEMNE NGTLWDPASV LPAGLMTFYG KTKPLDKSWH VMGLGYNPHI RPEDINGAAV 360 IHFNGNMKPW LDVAFNQYKH LWTKYVDTEM EFLTLCNFGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 6.0e-90 | 68 | 397 | 340 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 3.0e-95 | 28 | 397 | 396 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-97 | 15 | 398 | 408 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-102 | 37 | 397 | 384 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 7.0e-169 | 9 | 400 | 417 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD37314.1 | 0 | 2 | 400 | 105 | 504 | glycosyl transferase protein A-like [Oryza sativa Japonica Group] |
GenBank | EAY87516.1 | 0 | 10 | 400 | 103 | 493 | hypothetical protein OsI_08922 [Oryza sativa Indica Group] |
GenBank | EAZ36348.1 | 0 | 2 | 400 | 105 | 504 | hypothetical protein OsJ_20674 [Oryza sativa Japonica Group] |
RefSeq | NP_001048110.1 | 0 | 10 | 400 | 103 | 493 | Os02g0745400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002454284.1 | 0 | 1 | 400 | 93 | 492 | hypothetical protein SORBIDRAFT_04g028010 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.002 | 119 | 370 | 7 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.003 | 119 | 370 | 7 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.003 | 119 | 370 | 7 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE628867 | 249 | 139 | 387 | 0 |
DR809339 | 289 | 113 | 401 | 0 |
HO780097 | 418 | 9 | 401 | 0 |
EB158732 | 251 | 151 | 401 | 0 |
CJ809524 | 228 | 138 | 365 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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