| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00003354m |
| Family | GT29 |
| Protein Properties | Length: 353 Molecular Weight: 39562 Isoelectric Point: 8.8786 |
| Chromosome | Chromosome/Scaffold: 0314327 Start: 7 End: 1065 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT29 | 121 | 331 | 0 |
| PGRIPSCAVVGNSGILLRANHGALIDSHDAVFRLNNARIAGYAAHVGSKTNFSFINSNVLHLCARRPGCFCHPYGHGVPILLYICQATHFLDIAACNTTS SSRHGSPISVTDARLDVLCSRIVKYYSLRRFVAETGRAAEDWDRAHDAAMFHYSSGMQAIMVAVGVCDRVSVFGFGKSSDAKHHYHSNQKAELDLHDYEA EYAFYHDLAEH | |||
| Full Sequence |
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| Protein Sequence Length: 353 Download |
| ARLNATLLRL AAVDPSEAPL RRDVDDLLEG RLPVSAARDR ARAWRRDRLL HPLHLHHHRF 60 PLPRRGRYPD EDHDTLLHPL PRHDQQLHID PALRRALRSW HRLRRYDPAV LGSLPSLLSL 120 PGRIPSCAVV GNSGILLRAN HGALIDSHDA VFRLNNARIA GYAAHVGSKT NFSFINSNVL 180 HLCARRPGCF CHPYGHGVPI LLYICQATHF LDIAACNTTS SSRHGSPISV TDARLDVLCS 240 RIVKYYSLRR FVAETGRAAE DWDRAHDAAM FHYSSGMQAI MVAVGVCDRV SVFGFGKSSD 300 AKHHYHSNQK AELDLHDYEA EYAFYHDLAE HPQVVPFLKD AGFAVPPVVF YH* 360 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 2.0e-29 | 126 | 331 | 223 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY76560.1 | 0 | 2 | 352 | 47 | 393 | hypothetical protein OsI_04506 [Oryza sativa Indica Group] |
| RefSeq | NP_001044863.1 | 0 | 2 | 352 | 47 | 393 | Os01g0858900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151877.1 | 0 | 1 | 352 | 45 | 394 | sialyltransferase-like protein [Zea mays] |
| RefSeq | XP_002456665.1 | 0 | 1 | 352 | 47 | 396 | hypothetical protein SORBIDRAFT_03g040480 [Sorghum bicolor] |
| RefSeq | XP_002523786.1 | 0 | 3 | 352 | 96 | 434 | sialyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.00000000000002 | 38 | 309 | 25 | 262 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
| PDB | 2wnb_A | 0.00000000000002 | 38 | 309 | 25 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.00000000000007 | 38 | 309 | 25 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HX130640 | 230 | 123 | 352 | 0 |
| GD019237 | 230 | 108 | 337 | 0 |
| DR939789 | 231 | 123 | 353 | 0 |
| CN948046 | 218 | 123 | 340 | 0 |
| GD019237 | 29 | 324 | 352 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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