Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00003964m |
Family | GT31 |
Protein Properties | Length: 521 Molecular Weight: 57294.4 Isoelectric Point: 5.8981 |
Chromosome | Chromosome/Scaffold: 031180 Start: 491 End: 5527 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 309 | 469 | 3.4e-38 |
KRRMALRRTWMQYEAVRSGDVVVRFFSGLHKSEQVNMELWREAQLYGDIYKLLCTNQMEYLTKIVPTKYIMKTDDDAFVRIDEVVSSLKKSNSHGLLYGL ISFQSSPHRDKDSKWLISRKEWPFDMYPPWAHGPVLGHQELTLQLFKLEDVAMGIWIQQYK |
Full Sequence |
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Protein Sequence Length: 521 Download |
MRKCSGVLLI LTLALSWGLL RRSDALPGTA AGVLEAADAW RNLTQAVAAA AAAAGEVGRA 60 GGPGCPASVE GDLGAGRARI PCGLAEGAAV TVIGVPREGA ARFQVEMVGA GGQVLMHVNV 120 SLGAAGMVVE QNSWTPEEGW GEWERCPPVG DVGRSNSSLQ RSLVDGLVRC NEKVGASVIQ 180 ENNNTMINVT GNQPEDGQKP KERSQLSGSF SIVEGEPFTV TVWAGVEGFH MTVNGRHETS 240 FAYRERSEPW LIAEVKVSGD LELLSLLANG LPVSEEIDMA SVALLKAPPL PKKRTFLLVG 300 VFSTGNNFKR RMALRRTWMQ YEAVRSGDVV VRFFSGLHKS EQVNMELWRE AQLYGDIYKL 360 LCTNQMEYLT KIVPTKYIMK TDDDAFVRID EVVSSLKKSN SHGLLYGLIS FQSSPHRDKD 420 SKWLISRKEW PFDMYPPWAH GPVLGHQELT LQLFKLEDVA MGIWIQQYKS SGQQVNIVTD 480 DRFYSEGCES DYDLAHYQTP RLMMCLWEKL KTDYQAVCCE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 1.0e-10 | 81 | 265 | 187 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
pfam00337 | Gal-bind_lectin | 9.0e-16 | 78 | 265 | 189 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
cd00070 | GLECT | 2.0e-16 | 77 | 266 | 190 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam01762 | Galactosyl_T | 8.0e-24 | 309 | 469 | 191 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 2.0e-163 | 15 | 519 | 561 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001042919.1 | 0 | 23 | 520 | 75 | 599 | Os01g0328900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150985.1 | 0 | 1 | 520 | 1 | 592 | beta 1, 3 galactosyltransferase [Zea mays] |
RefSeq | XP_002274418.1 | 0 | 10 | 520 | 93 | 637 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316064.1 | 0 | 19 | 520 | 81 | 611 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002457770.1 | 0 | 1 | 520 | 1 | 593 | hypothetical protein SORBIDRAFT_03g013300 [Sorghum bicolor] |