Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004209m |
Family | GH1 |
Protein Properties | Length: 543 Molecular Weight: 62204.2 Isoelectric Point: 6.8245 |
Chromosome | Chromosome/Scaffold: 038790 Start: 425 End: 4254 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 88 | 537 | 0 |
WFHPVFVFGAATAAYQIEGAWNEHGNGPSTWDHFCHNHPEMIAGWSNGNVAVNSYHLYEEDVKMLKEMGMYAYRFSISWSRILPKGTIEGGINYKGINYY KNLINKLKENEPYVTIFHWDTPQALEDKYGGFLNPWIIKDYTDFAKVCFDHFGDKVKHWFTFNEPHIFCSFAYGTGEHAPGRCSPNRNCAIPCGDSLNEP YLVGHNILLAHAEVADLYKTYYKGEDGHIGMALDVMFYEPYAKTFLDEQAQARSIDYNLGWFMEPVFRDEEKAKLVGSYDMMGLNYYTSRFSEHIDISPR FTPVLNPEEAYAREKMSGHDGNPIGLDTGIDWIKSYPKGLKDLLMIIKERYGNPPIYITENGTADVDNGNLSKSDALDDSIRLDYLQRHISAIKKSIDSG ADVRGHFTWSLVENFEWASGYTARFGLIYIDRNDGFKRTMKKSAKWFKKF |
Full Sequence |
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Protein Sequence Length: 543 Download |
MALLASALMS RTTHPGLIRS HIGPNGDNLS WRLPSKEKSK RRCDPSLRSQ AERMSSELGQ 60 EHLMPSERMG SELGQEHLMP REIPRRDWFH PVFVFGAATA AYQIEGAWNE HGNGPSTWDH 120 FCHNHPEMIA GWSNGNVAVN SYHLYEEDVK MLKEMGMYAY RFSISWSRIL PKGTIEGGIN 180 YKGINYYKNL INKLKENEPY VTIFHWDTPQ ALEDKYGGFL NPWIIKDYTD FAKVCFDHFG 240 DKVKHWFTFN EPHIFCSFAY GTGEHAPGRC SPNRNCAIPC GDSLNEPYLV GHNILLAHAE 300 VADLYKTYYK GEDGHIGMAL DVMFYEPYAK TFLDEQAQAR SIDYNLGWFM EPVFRDEEKA 360 KLVGSYDMMG LNYYTSRFSE HIDISPRFTP VLNPEEAYAR EKMSGHDGNP IGLDTGIDWI 420 KSYPKGLKDL LMIIKERYGN PPIYITENGT ADVDNGNLSK SDALDDSIRL DYLQRHISAI 480 KKSIDSGADV RGHFTWSLVE NFEWASGYTA RFGLIYIDRN DGFKRTMKKS AKWFKKFNGA 540 SRK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 6.0e-113 | 93 | 537 | 477 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 3.0e-115 | 86 | 539 | 478 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-127 | 93 | 536 | 474 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-135 | 93 | 534 | 465 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-176 | 86 | 538 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD02839.1 | 0 | 1 | 543 | 1 | 551 | beta-D-glucosidase beta subunit precursor [Avena sativa] |
GenBank | AAK49119.1 | 0 | 3 | 543 | 5 | 550 | cyanogenic beta-glucosidase dhurrinase-2 [Sorghum bicolor] |
RefSeq | NP_001148152.1 | 0 | 1 | 543 | 1 | 548 | non-cyanogenic beta-glucosidase [Zea mays] |
RefSeq | XP_002442029.1 | 0 | 1 | 543 | 1 | 551 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
RefSeq | XP_002442031.1 | 0 | 1 | 543 | 1 | 553 | hypothetical protein SORBIDRAFT_08g007586 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v02_E | 0 | 1 | 543 | 1 | 551 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v03_A | 0 | 1 | 543 | 1 | 551 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_F | 0 | 1 | 543 | 1 | 551 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_D | 0 | 1 | 543 | 1 | 551 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_C | 0 | 1 | 543 | 1 | 551 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
DIMBOA-glucoside activation | RXN-7082 | EC-3.2.1 | DIMBOA glucoside β-D-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK567908 | 243 | 212 | 435 | 0 |
JK571315 | 241 | 228 | 449 | 0 |
FL869904 | 258 | 93 | 348 | 0 |
FL806203 | 254 | 83 | 334 | 0 |
FL699476 | 271 | 109 | 377 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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