y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004298m |
Family | CE16 |
Protein Properties | Length: 298 Molecular Weight: 32099 Isoelectric Point: 5.8568 |
Chromosome | Chromosome/Scaffold: 039045 Start: 72 End: 1589 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 28 | 273 | 1e-23 |
YAGASNDQLLTGVNFASAAAGIRDETGQQLGQRISFGGQLQNYQAAVQQLVSILGDEDSAASHLSRCIFTVGMGSNDYLNNYFMPAVYSTSQQYTPEQFA DALAGQYAQQLRTLYSLGARKVALMGVGQVGCSPNELAQRSPDGATCAAEINGAIDIFNRRLVALVDQFNALPGAHFTYINAYGIFEDILRAPGSHGLTV TNRGCCGVGRNNGQVTCLPFQTPCANRDEYLFWDAFHPTEAANILV |
Full Sequence |
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Protein Sequence Length: 298 Download |
MPSNQLHHVF VCRFSARLLG FDDYIPAYAG ASNDQLLTGV NFASAAAGIR DETGQQLGQR 60 ISFGGQLQNY QAAVQQLVSI LGDEDSAASH LSRCIFTVGM GSNDYLNNYF MPAVYSTSQQ 120 YTPEQFADAL AGQYAQQLRT LYSLGARKVA LMGVGQVGCS PNELAQRSPD GATCAAEING 180 AIDIFNRRLV ALVDQFNALP GAHFTYINAY GIFEDILRAP GSHGLTVTNR GCCGVGRNNG 240 QVTCLPFQTP CANRDEYLFW DAFHPTEAAN ILVGRRAYSA ALPSDVHPVD LRTLAQL* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3240 | COG3240 | 1.0e-8 | 22 | 297 | 279 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
pfam00657 | Lipase_GDSL | 1.0e-14 | 20 | 276 | 263 | + GDSL-like Lipase/Acylhydrolase. | ||
cd01846 | fatty_acyltransferase_like | 4.0e-25 | 23 | 280 | 260 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 1.0e-41 | 14 | 273 | 266 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 5.0e-87 | 14 | 280 | 270 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB56037.1 | 0 | 16 | 297 | 81 | 363 | putative proline-rich protein [Oryza sativa Japonica Group] |
RefSeq | NP_001044240.1 | 0 | 16 | 297 | 129 | 411 | Os01g0748500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001056057.1 | 0 | 16 | 297 | 84 | 365 | Os05g0518300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149080.1 | 0 | 16 | 297 | 88 | 369 | anther-specific proline-rich protein APG [Zea mays] |
RefSeq | XP_002456353.1 | 0 | 16 | 297 | 89 | 370 | hypothetical protein SORBIDRAFT_03g034560 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK211015 | 276 | 23 | 298 | 0 |
FE625653 | 227 | 55 | 281 | 0 |
HO852316 | 283 | 16 | 298 | 0 |
ES305557 | 261 | 16 | 276 | 0 |
DR824022 | 216 | 83 | 298 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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