Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004308m |
Family | GT90 |
Protein Properties | Length: 518 Molecular Weight: 58370.1 Isoelectric Point: 8.6672 |
Chromosome | Chromosome/Scaffold: 038523 Start: 601 End: 2802 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 198 | 445 | 0 |
RVPDLDIMFACDDPGARRRLPSPSEAPPVFRYSKDASTLDAVFPDWSFSGWPEVGIRPWTQMLKEVARENERKGAPARFRIRHELMRCNASNGQEWNAAF SARYGYIWRIIMFKFYWKIEWLHDVWCGSELVMIMVNGCRYKIYVEGNAWSVSEKYILACDSPVLFVTTLFQDILSRALVAGKHYWPINREHICKSIKFA VDWGNEHPAQARLIGEQGSRFVREEMSMDYVYDYMLHLLTEYAKLLWY |
Full Sequence |
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Protein Sequence Length: 518 Download |
MKGAVFPAAA SGERAGRSSP SLAAVLRTKG VGSVMVGLVV LAMLLGARRW VDIDASSLLG 60 NTVSIGASSG QRRRHHSNST APLVPIPFTC GNATSPQQPK CPTPPAPPPP STTLLQAVPG 120 GPAPSCPDYF RYIHDDLRPW RGAGITREAV ERARRHAYFR LVVVGGRAFV ETYRRAYQTR 180 DVFTQWGILQ LLRRYSGRVP DLDIMFACDD PGARRRLPSP SEAPPVFRYS KDASTLDAVF 240 PDWSFSGWPE VGIRPWTQML KEVARENERK GAPARFRIRH ELMRCNASNG QEWNAAFSAR 300 YGYIWRIIMF KFYWKIEWLH DVWCGSELVM IMVNGCRYKI YVEGNAWSVS EKYILACDSP 360 VLFVTTLFQD ILSRALVAGK HYWPINREHI CKSIKFAVDW GNEHPAQARL IGEQGSRFVR 420 EEMSMDYVYD YMLHLLTEYA KLLWYKPTVP EKAVEICTES MACPARGLHR ECMMGSMERH 480 AAGFEPCTLP PPFTEEEAKE IADREAEVLR NVENMEG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 3.0e-45 | 401 | 516 | 116 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 5.0e-69 | 198 | 446 | 271 | + Putative lipopolysaccharide-modifying enzyme. | ||
pfam05686 | Glyco_transf_90 | 4.0e-71 | 122 | 269 | 151 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD69335.1 | 0 | 23 | 497 | 46 | 519 | unknown protein [Oryza sativa Japonica Group] |
GenBank | EEE65104.1 | 0 | 23 | 497 | 51 | 475 | hypothetical protein OsJ_20160 [Oryza sativa Japonica Group] |
RefSeq | NP_001056838.1 | 0 | 23 | 497 | 51 | 524 | Os06g0152700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060764.1 | 0 | 53 | 515 | 106 | 571 | Os08g0101800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437850.1 | 0 | 10 | 517 | 47 | 552 | hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO128895 | 180 | 337 | 516 | 0 |
HO179717 | 180 | 337 | 516 | 0 |
HO180311 | 252 | 181 | 416 | 0 |
HO127770 | 244 | 186 | 413 | 0 |
EX132718 | 308 | 187 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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