Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00004795m |
Family | CE10 |
Protein Properties | Length: 314 Molecular Weight: 32531.9 Isoelectric Point: 5.8352 |
Chromosome | Chromosome/Scaffold: 0176036 Start: 304 End: 1288 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 46 | 310 | 0 |
GVASKDVPILPEAGVSARVYLPAPRSSGGYGGMLPVLVLFHGGGFCLGSAFDPRVHAHANRLAAAAGAIVVSVDYRLAPEHPVPAIYGDAWAALQWVAAH AAGQGPEPWLAAHADLGRVHVGGESAGANIAHHAAMRAGAEDLGHGVKLSSLTDEMGMVLLRELVRLWPVVCPGTSGCDDDPLINPMAEGAPNLASLGCR RVLVCLGGKDPMRGRGSLYCEKLKGSGWCGEVEDWEAHGQGHGFHFLRPTSTEAEAQVGVIAEFL |
Full Sequence |
---|
Protein Sequence Length: 314 Download |
MSDIGAGGGD EVILDAPGFI RVYRSGHVER FLPVDFAPPS TDAATGVASK DVPILPEAGV 60 SARVYLPAPR SSGGYGGMLP VLVLFHGGGF CLGSAFDPRV HAHANRLAAA AGAIVVSVDY 120 RLAPEHPVPA IYGDAWAALQ WVAAHAAGQG PEPWLAAHAD LGRVHVGGES AGANIAHHAA 180 MRAGAEDLGH GVKLSSLTDE MGMVLLRELV RLWPVVCPGT SGCDDDPLIN PMAEGAPNLA 240 SLGCRRVLVC LGGKDPMRGR GSLYCEKLKG SGWCGEVEDW EAHGQGHGFH FLRPTSTEAE 300 AQVGVIAEFL SYG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 1.0e-5 | 64 | 124 | 65 | + Carboxylesterase family. | ||
COG2272 | PnbA | 1.0e-5 | 36 | 125 | 90 | + Carboxylesterase type B [Lipid metabolism] | ||
cd00312 | Esterase_lipase | 4.0e-6 | 64 | 256 | 208 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 6.0e-19 | 36 | 310 | 297 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 8.0e-33 | 82 | 291 | 230 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC83733.1 | 0 | 10 | 311 | 15 | 326 | hypothetical protein OsI_29586 [Oryza sativa Indica Group] |
GenBank | EEC84712.1 | 0 | 1 | 313 | 1 | 329 | hypothetical protein OsI_31672 [Oryza sativa Indica Group] |
RefSeq | NP_001063401.1 | 0 | 1 | 313 | 1 | 329 | Os09g0462300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148405.1 | 0 | 1 | 313 | 1 | 327 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002462498.1 | 0 | 10 | 311 | 9 | 326 | hypothetical protein SORBIDRAFT_02g026816 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 4e-30 | 32 | 308 | 38 | 324 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 2o7r_A | 4e-30 | 32 | 308 | 38 | 324 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 3e-23 | 40 | 311 | 63 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 3e-23 | 40 | 311 | 63 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 2e-21 | 27 | 311 | 47 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL886615 | 234 | 95 | 314 | 0 |
EG400103 | 260 | 28 | 271 | 0 |
FL886616 | 246 | 28 | 259 | 0 |
FL918197 | 244 | 1 | 230 | 0 |
FL886616 | 34 | 238 | 269 | 0.000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|