Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004851m |
Family | GT14 |
Protein Properties | Length: 196 Molecular Weight: 22233.3 Isoelectric Point: 6.8666 |
Chromosome | Chromosome/Scaffold: 017645 Start: 3775 End: 6008 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 2 | 104 | 2.49431e-43 |
KKKADVFWIPQRRSVPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPRTVLMYYSNFISSPEGYFHTVVCNAEEFKNTTVNHDLHYISWDNPPKQHPHYLT VED |
Full Sequence |
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Protein Sequence Length: 196 Download |
MKKKADVFWI PQRRSVPTAF KLFTGSAWMA LSRPFVEYCI WGWDNLPRTV LMYYSNFISS 60 PEGYFHTVVC NAEEFKNTTV NHDLHYISWD NPPKQHPHYL TVEDLDRMVA SDAPFARKFH 120 ADDPVLDKID DEILSRGADM PTPGGWCAGT RENGSDPCSV IGDTSLLLPG RGAVRLQRLV 180 TSLLSEEKFH PRQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-31 | 19 | 109 | 95 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-108 | 1 | 195 | 195 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACO87683.1 | 0 | 1 | 195 | 230 | 424 | b-1-3-galactosyl-o-glycosyl-glycoprotein [Brachypodium sylvaticum] |
EMBL | CAH05144.1 | 0 | 1 | 195 | 229 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
GenBank | EAZ21364.1 | 0 | 1 | 195 | 207 | 401 | hypothetical protein OsJ_37021 [Oryza sativa Japonica Group] |
RefSeq | NP_001067391.1 | 0 | 1 | 195 | 232 | 426 | Os12g0639700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442623.1 | 0 | 1 | 195 | 231 | 425 | hypothetical protein SORBIDRAFT_08g023170 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE653940 | 196 | 1 | 196 | 0 |
JG778861 | 190 | 7 | 196 | 0 |
DR785200 | 194 | 3 | 196 | 0 |
BU100707 | 198 | 1 | 196 | 0 |
HX159439 | 198 | 1 | 196 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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