Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00005723m |
Family | GH27 |
Protein Properties | Length: 325 Molecular Weight: 35935.2 Isoelectric Point: 4.7731 |
Chromosome | Chromosome/Scaffold: 0182458 Start: 40 End: 2281 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 93 | 269 | 0 |
AQPGSLGHEEQDAKTFAAWGVDYLKYDNCNNGDIKPLERYPEMSKALMKTGRPIYFSLCEWGDMHPARWGAAYGNSWRTTNDIADTWESMIATADQNEVW AEYARPGGWNDPDMLEVGNGGMTNSEYVVHFSLWAISKAPLIIGCDVRHMSQETYDILANKEVIAVNQDPLGVQGKK |
Full Sequence |
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Protein Sequence Length: 325 Download |
WNSWNHFQCG GNGEVVIRET ADALVSTGLA ALGYKYVNID DCWAEPKRDA TGNLVANTKT 60 FPHGIKALAD YVHSKALKLG IYSDAGFQTC AKAQPGSLGH EEQDAKTFAA WGVDYLKYDN 120 CNNGDIKPLE RYPEMSKALM KTGRPIYFSL CEWGDMHPAR WGAAYGNSWR TTNDIADTWE 180 SMIATADQNE VWAEYARPGG WNDPDMLEVG NGGMTNSEYV VHFSLWAISK APLIIGCDVR 240 HMSQETYDIL ANKEVIAVNQ DPLGVQGKKV RMEGSNEIWA APLSDYRTAV VLLNRHATDG 300 ATITAHWDDV GLPAGLDVEA RDLWQ |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 4.0e-19 | 1 | 154 | 199 | + Melibiase. | ||
PLN03231 | PLN03231 | 6.0e-23 | 1 | 264 | 350 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 2.0e-163 | 1 | 325 | 328 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 1 | 325 | 325 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 1 | 324 | 324 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG13536.1 | 0 | 1 | 325 | 51 | 375 | AC023240_9 putative alpha-galactosidase [Oryza sativa Japonica Group] |
GenBank | ACF78913.1 | 0 | 1 | 324 | 57 | 380 | unknown [Zea mays] |
EMBL | CAN75822.1 | 0 | 1 | 325 | 3 | 325 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001147362.1 | 0 | 1 | 324 | 55 | 378 | alpha-galactosidase [Zea mays] |
RefSeq | XP_002467021.1 | 0 | 1 | 324 | 52 | 375 | hypothetical protein SORBIDRAFT_01g018410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 324 | 13 | 334 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 1 | 325 | 13 | 365 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 1 | 324 | 13 | 356 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 1 | 324 | 13 | 356 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 1 | 300 | 13 | 330 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE590887 | 257 | 1 | 257 | 0 |
ES291939 | 247 | 78 | 324 | 0 |
BQ483923 | 242 | 1 | 242 | 0 |
HO164681 | 233 | 40 | 272 | 0 |
GT034265 | 324 | 1 | 324 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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