| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00005986m |
| Family | GH9 |
| Protein Properties | Length: 382 Molecular Weight: 42132.9 Isoelectric Point: 9.4383 |
| Chromosome | Chromosome/Scaffold: 0180949 Start: 286 End: 2450 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 16 | 359 | 0 |
| TQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAAALAAASIVFKDNKAYSQKLVHGATTLFQFARNRRGRYSAGGSDAAKLYNSTSYWDEFVWGSSWM YLATGNSSYLTLATHPKLAKHAGAFWGGPDYGVFSWDNKLTGAQVLLSRLRLFLSPGYPYEEMLRAFHNQTSIIMCSYLPIFKSFNRTKGGLIQLNHGKP HPLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVLRSFARTQIEYILGKNPLKMSYVVGFGKHYPKHVHHRGASIPKNAVHYGCKGGWKWRDTKK PNPNIIVGAMVAGPDRHDGFKDARKNYNYTEATLAGNAGLVAAL | |||
| Full Sequence |
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| Protein Sequence Length: 382 Download |
| MGRLQVGSAA TSPGSTQPND HYCWMRPEDI DYPRPVVECH ACSDLAAEMA AALAAASIVF 60 KDNKAYSQKL VHGATTLFQF ARNRRGRYSA GGSDAAKLYN STSYWDEFVW GSSWMYLATG 120 NSSYLTLATH PKLAKHAGAF WGGPDYGVFS WDNKLTGAQV LLSRLRLFLS PGYPYEEMLR 180 AFHNQTSIIM CSYLPIFKSF NRTKGGLIQL NHGKPHPLQY VVNAAFLASV FSDYLEAADT 240 PGWYCGPHFY SIEVLRSFAR TQIEYILGKN PLKMSYVVGF GKHYPKHVHH RGASIPKNAV 300 HYGCKGGWKW RDTKKPNPNI IVGAMVAGPD RHDGFKDARK NYNYTEATLA GNAGLVAALV 360 ALSGEGHGVD KNTMFSAVPP CP |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 6.0e-66 | 20 | 346 | 338 | + endoglucanase | ||
| PLN02613 | PLN02613 | 3.0e-67 | 20 | 346 | 338 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-68 | 16 | 346 | 358 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-100 | 5 | 346 | 348 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 7.0e-103 | 4 | 341 | 348 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36366.1 | 0 | 5 | 378 | 230 | 603 | unknown [Zea mays] |
| GenBank | EEE58992.1 | 0 | 4 | 378 | 229 | 603 | hypothetical protein OsJ_10702 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050004.1 | 0 | 4 | 378 | 229 | 603 | Os03g0329500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147537.1 | 0 | 5 | 378 | 230 | 604 | endo-1,4-beta-glucanase [Zea mays] |
| RefSeq | XP_002465324.1 | 0 | 5 | 378 | 231 | 604 | hypothetical protein SORBIDRAFT_01g036480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 1.96182e-44 | 20 | 367 | 123 | 433 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1ksc_A | 1.96182e-44 | 20 | 367 | 123 | 433 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1ks8_A | 1.96182e-44 | 20 | 367 | 123 | 433 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia7_A | 1e-27 | 20 | 359 | 125 | 423 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia6_A | 1e-27 | 20 | 359 | 125 | 423 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO796213 | 375 | 5 | 378 | 0 |
| HO794674 | 375 | 5 | 378 | 0 |
| BF010444 | 378 | 5 | 378 | 0 |
| FL860088 | 258 | 84 | 341 | 0 |
| FL768670 | 248 | 99 | 346 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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