CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00006084m
FamilyGT2
Protein PropertiesLength: 174 Molecular Weight: 19350.6 Isoelectric Point: 10.2127
ChromosomeChromosome/Scaffold: 046503 Start: 4215 End: 5600
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT241113.3e-27
  ARPRKLGLGTAYLHGLKHAWGEFVVIMDADLSHHPKYLPSFIRKQKETGADVVTGTRYVKNGGVHGWNLMRKLTSRGANVLAQTLLQPGASDLTGSFRLY
  KRDVLEDL
Full Sequence
Protein Sequence     Length: 174     Download
LLRARPRKLG LGTAYLHGLK HAWGEFVVIM DADLSHHPKY LPSFIRKQKE TGADVVTGTR    60
YVKNGGVHGW NLMRKLTSRG ANVLAQTLLQ PGASDLTGSF RLYKRDVLED LISSCVSKGY    120
VFQMEMIVRA TRKGYHIDEV PITFVDRVFG ISKLGGSEIV EYLKGLVYLL LTT*          180
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd04187DPM1_like_bac3.0e-1914113100+
cd04188DPG_synthase8.0e-215146144+
cd04179DPM_DPG-synthase_like3.0e-465130126+
cd06442DPM1_like3.0e-971169169+
PLN02726PLN027264.0e-1291173173+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEEC76440.10117371243hypothetical protein OsI_14131 [Oryza sativa Indica Group]
RefSeqNP_001051751.10117371243Os03g0824400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001140901.10117370242hypothetical protein LOC100272978 [Zea mays]
RefSeqNP_564118.10117374246dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana]
RefSeqXP_002466177.10117370242hypothetical protein SORBIDRAFT_01g002910 [Sorghum bicolor]
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesis2.4.1.83-RXNEC-2.4.1.83dolichyl-phosphate β-D-mannosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG92342917411740
JG91495017411740
CA11596517411740
HO26722517411740
HO26722417411740
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00839.1Aquca_007_00839.2
Arabidopsis lyrata889509
Arabidopsis thalianaAT1G20575.1
Brachypodium distachyonBradi2g19800.1
Brassica rapaBra025828Bra012235
Capsella rubellaCarubv10010457mCarubv10010118m
Chlamydomonas reinhardtiiCre03.g150950.t1.1
Citrus clementinaCiclev10003501m
Citrus sinensisorange1.1g026146m
Cucumis sativusCucsa.272070.1Cucsa.272070.2Cucsa.272070.3Cucsa.272070.4
Eucalyptus grandisEucgr.F01769.1
Fragaria vescamrna01849.1-v1.0-hybrid
Glycine maxGlyma13g24040.2Glyma07g32560.4Glyma07g32560.3Glyma07g32560.1Glyma13g24040.1
Gossypium raimondiiGorai.005G113700.2Gorai.005G113700.1Gorai.005G113700.3Gorai.005G113700.4Gorai.002G116900.2
Gorai.002G116900.1
Linum usitatissimumLus10013228Lus10030748
Malus domesticaMDP0000284475
Manihot esculentacassava4.1_014960mcassava4.1_014955m
Medicago truncatulaMedtr2g097220.1
Mimulus guttatusmgv1a012434m
Oryza sativaLOC_Os03g60939.1
Panicum virgatumPavirv00010357mPavirv00010356mPavirv00041144mPavirv00011250mPavirv00010359m
Physcomitrella patensPp1s182_58V6.1
Phaseolus vulgarisPhvul.003G057700.1
Picea abiesMA_10426906g0010MA_158782g0100.50.214MA_159042g1170
Populus trichocarpaPotri.005G250900.1Potri.002G010300.1Potri.005G250900.2
Prunus persicappa010139m
Ricinus communis30170.m014358
Setaria italicaSi039247mSi037228m
Selaginella moellendorffii98270
Sorghum bicolorSb01g002910.1
Thellungiella halophilaThhalv10008599m
Vitis viniferaGSVIVT01008672001
Volvox carteriVocar20000557m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny