Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00006123m |
Family | GH9 |
Protein Properties | Length: 518 Molecular Weight: 56895.6 Isoelectric Point: 6.1581 |
Chromosome | Chromosome/Scaffold: 046128 Start: 2342 End: 5081 |
Description | glycosyl hydrolase 9B18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 50 | 504 | 0 |
DYRDALAKSILFFEGQRSGRLPPGQRASWRGDSGVSDGAAAGVDLEGGYYDAGDNVKFGFPMAFTTTMLAWSVVEFGGDMPRDERRHAAGAVRWATDYLL KTLAHPGVIFLQVGDPWKDHDCWERPEDMDTERTVYNVSAGRPGSDIAGETAAASMVFRDDDREYAETLLASARKAFEFADTYKGAYSDDPDLRAGGCPF YCDFNGYQDELLWGAAWLRRASKDDTFLQYIQNNGKTLGAEDSSNEFGWDNKHTGLNVLVSKEFIEGEVLSLQSYKEFADSFICTLIPESSSPHITYTPG GMLYKPGGSNMQHVTSISFLLLTYAKYLSKSSHTVNCGDISVGPATLQRQAKKQVDYLLGDNPMKMSYMIGYGDRYPQRIHHRGSSLPSIKDHPQRIACK EGTPYYNSSGANPNPLVGAVVGGPGEDDAYEDDRADFRKSEPTTYINAPLVGVLA |
Full Sequence |
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Protein Sequence Length: 518 Download |
MAPRVAPRPS STHRLCVRIL LASFLAAHRL VPSCSASFFS FFPAAARRHD YRDALAKSIL 60 FFEGQRSGRL PPGQRASWRG DSGVSDGAAA GVDLEGGYYD AGDNVKFGFP MAFTTTMLAW 120 SVVEFGGDMP RDERRHAAGA VRWATDYLLK TLAHPGVIFL QVGDPWKDHD CWERPEDMDT 180 ERTVYNVSAG RPGSDIAGET AAASMVFRDD DREYAETLLA SARKAFEFAD TYKGAYSDDP 240 DLRAGGCPFY CDFNGYQDEL LWGAAWLRRA SKDDTFLQYI QNNGKTLGAE DSSNEFGWDN 300 KHTGLNVLVS KEFIEGEVLS LQSYKEFADS FICTLIPESS SPHITYTPGG MLYKPGGSNM 360 QHVTSISFLL LTYAKYLSKS SHTVNCGDIS VGPATLQRQA KKQVDYLLGD NPMKMSYMIG 420 YGDRYPQRIH HRGSSLPSIK DHPQRIACKE GTPYYNSSGA NPNPLVGAVV GGPGEDDAYE 480 DDRADFRKSE PTTYINAPLV GVLAFLVGNP NPGPIRH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03009 | PLN03009 | 0 | 49 | 512 | 468 | + cellulase | ||
PLN02266 | PLN02266 | 0 | 6 | 506 | 505 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 49 | 512 | 468 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 50 | 504 | 464 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 50 | 511 | 469 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70805.1 | 0 | 48 | 512 | 26 | 494 | hypothetical protein [Vitis vinifera] |
GenBank | EEE70095.1 | 0 | 49 | 517 | 40 | 516 | hypothetical protein OsJ_30098 [Oryza sativa Japonica Group] |
RefSeq | NP_001063747.1 | 0 | 49 | 517 | 40 | 515 | Os09g0530200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002275280.1 | 0 | 49 | 512 | 27 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002460560.1 | 0 | 1 | 517 | 1 | 523 | hypothetical protein SORBIDRAFT_02g030710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 49 | 507 | 3 | 429 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1ksc_A | 0 | 49 | 507 | 3 | 429 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1ks8_A | 0 | 49 | 507 | 3 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 50 | 507 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 50 | 507 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |