| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00006239m |
| Family | GT8 |
| Protein Properties | Length: 393 Molecular Weight: 45576.2 Isoelectric Point: 7.513 |
| Chromosome | Chromosome/Scaffold: 045262 Start: 3990 End: 5590 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT8 | 64 | 365 | 0 |
| CLNMRLTLEYFKSRSIRTDQQNRQKLESPAFQHYVIFSRNVLAVSTTINSTVLNCQDSGSIVFHLFTDAQNFYAMKHWFERNSYSEATVHVTNIEDHLKL PKHAEMQQLLPSEEFRVTIRNYSEPSLRQMKTEYISVFGHSHFLLPDLLPGLNRVVVLDDDLIVQKDLSSLWNLNMDGKVIGAVQFCGVKLGQLRSYISE HSFNSDACVWLSGLNVIELEKWRDLHVTSLYDQSLQKLQKESLPSKRLKALPVSMLAFQDLIYPLEDSWVLSGLGHDYGISKDHIEKAATLHYNGVMKPW LD | |||
| Full Sequence |
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| Protein Sequence Length: 393 Download |
| FAKKLEKMEH TIERAKSCEV GCSNVERKLR QLLDITEDEA YFHTRQSAIL YHLGVQTMPK 60 THHCLNMRLT LEYFKSRSIR TDQQNRQKLE SPAFQHYVIF SRNVLAVSTT INSTVLNCQD 120 SGSIVFHLFT DAQNFYAMKH WFERNSYSEA TVHVTNIEDH LKLPKHAEMQ QLLPSEEFRV 180 TIRNYSEPSL RQMKTEYISV FGHSHFLLPD LLPGLNRVVV LDDDLIVQKD LSSLWNLNMD 240 GKVIGAVQFC GVKLGQLRSY ISEHSFNSDA CVWLSGLNVI ELEKWRDLHV TSLYDQSLQK 300 LQKESLPSKR LKALPVSMLA FQDLIYPLED SWVLSGLGHD YGISKDHIEK AATLHYNGVM 360 KPWLDLGIHN YKSYWRKYMT TGEMFMRECN IH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 8.0e-89 | 8 | 391 | 400 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 2.0e-96 | 3 | 392 | 402 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 2.0e-99 | 4 | 391 | 400 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 8.0e-105 | 96 | 380 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02769 | PLN02769 | 0 | 1 | 392 | 394 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA95691.2 | 0 | 1 | 392 | 202 | 596 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC67573.1 | 0 | 1 | 392 | 248 | 642 | hypothetical protein OsI_34919 [Oryza sativa Indica Group] |
| GenBank | EEC68769.1 | 0 | 1 | 392 | 265 | 659 | hypothetical protein OsI_37298 [Oryza sativa Indica Group] |
| RefSeq | NP_001065619.1 | 0 | 1 | 392 | 248 | 642 | Os11g0124900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441763.1 | 0 | 1 | 392 | 260 | 654 | hypothetical protein SORBIDRAFT_08g002010 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG911389 | 273 | 26 | 298 | 0 |
| FL772161 | 267 | 84 | 350 | 0 |
| FL845691 | 219 | 31 | 249 | 0 |
| DV503663 | 265 | 125 | 386 | 0 |
| FL845691 | 28 | 251 | 278 | 0.00000003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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