Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00006286m |
Family | AA1 |
Protein Properties | Length: 583 Molecular Weight: 63292.8 Isoelectric Point: 8.7739 |
Chromosome | Chromosome/Scaffold: 044755 Start: 1871 End: 5388 |
Description | laccase 17 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 33 | 570 | 0 |
TRYYDFNVTMANVTRLCATKSIVTVNGQFPGPKLVAREGDRVVIRVTNHAQHNISLHWHGIRQLRTGWADGPAYITQCPIQTGQSYVYNFTVTGQRGTLW WHAHISWLRATVYGPLVILPKLGVPYPFPAPYKEVPVIFGEWWQADTEVVVKQALQTGGGPNVSDAHIINGLPGPLYNCSAKDTYKLKVKPGKTYMLRLI NAALNDELFFSVANHSLTVVEVDAVYVKPFTVDTLIIGPGQTTNVLLTAKPFYPGANYYMSAAPYSAARPGTFDNTTVAGILEYEYPDAPAAASFNKALP LHKPALPALNDTNFVGNFTAKLRSLATKQYPAAVPKAVDRRFFFTVGLGTHPCPANTTCQGPTNTTQFAASMNNVSFVLPTRALLHSHFTGLSSGVYSPD FPVSPLTPFNYTGTPPNNTNVASGTKLMVIPYGASVELVMQGTSILGIESHPLHLHGFNFFVVGQGYGNYDPVNDPAKFNLVDPVERNTVGVPAGGWVAI RFLADNPGVWFMHCHLEVHTTWGLRMAWLVLDGSLPHQ |
Full Sequence |
---|
Protein Sequence Length: 583 Download |
MAMALSSSSA LPCSLLMAAL MLLASIAQVQ GITRYYDFNV TMANVTRLCA TKSIVTVNGQ 60 FPGPKLVARE GDRVVIRVTN HAQHNISLHW HGIRQLRTGW ADGPAYITQC PIQTGQSYVY 120 NFTVTGQRGT LWWHAHISWL RATVYGPLVI LPKLGVPYPF PAPYKEVPVI FGEWWQADTE 180 VVVKQALQTG GGPNVSDAHI INGLPGPLYN CSAKDTYKLK VKPGKTYMLR LINAALNDEL 240 FFSVANHSLT VVEVDAVYVK PFTVDTLIIG PGQTTNVLLT AKPFYPGANY YMSAAPYSAA 300 RPGTFDNTTV AGILEYEYPD APAAASFNKA LPLHKPALPA LNDTNFVGNF TAKLRSLATK 360 QYPAAVPKAV DRRFFFTVGL GTHPCPANTT CQGPTNTTQF AASMNNVSFV LPTRALLHSH 420 FTGLSSGVYS PDFPVSPLTP FNYTGTPPNN TNVASGTKLM VIPYGASVEL VMQGTSILGI 480 ESHPLHLHGF NFFVVGQGYG NYDPVNDPAK FNLVDPVERN TVGVPAGGWV AIRFLADNPG 540 VWFMHCHLEV HTTWGLRMAW LVLDGSLPHQ KLLPPPSDLP KC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-54 | 39 | 153 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 6.0e-71 | 49 | 556 | 537 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 7.0e-79 | 26 | 558 | 565 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-88 | 33 | 551 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 582 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28855.1 | 0 | 3 | 582 | 1 | 585 | unknown [Zea mays] |
RefSeq | NP_001044772.1 | 0 | 28 | 582 | 25 | 579 | Os01g0842400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105875.1 | 0 | 5 | 582 | 1 | 587 | putative laccase [Zea mays] |
RefSeq | NP_001146658.1 | 0 | 5 | 582 | 1 | 584 | hypothetical protein LOC100280258 [Zea mays] |
RefSeq | XP_002458746.1 | 0 | 5 | 582 | 1 | 579 | hypothetical protein SORBIDRAFT_03g039520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 34 | 556 | 4 | 517 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asq_A | 0 | 34 | 556 | 4 | 517 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_B | 0 | 34 | 556 | 4 | 517 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_A | 0 | 34 | 556 | 4 | 517 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1aso_B | 0 | 34 | 556 | 4 | 517 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |