Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00006362m |
Family | GH9 |
Protein Properties | Length: 324 Molecular Weight: 35717.8 Isoelectric Point: 5.7646 |
Chromosome | Chromosome/Scaffold: 042924 Start: 3514 End: 6115 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 298 | 0 |
DYGDALSKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTLLSWGVLEYGAGVSAAAELAHALQAIKWGTDYF IKAHTAPNELWAQVGDGGSDHYCWQRPEDMTTSRRAYKVDADNPGSEVAAETAAAMAAASLVFRRAGDAHYAHLLLHHAQQLFEFADRYRGRYDESVEVV KSYYPSSSGYQDELLWAALWLHRATGRRDYLEYALANADDFGGTGWAVSEFSWDIKYAGLQVLASELLVE |
Full Sequence |
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Protein Sequence Length: 324 Download |
MSDVSGRFVV AAAVVAVSLA AAAATAAHDY GDALSKSLLY FEAQRSGRLP YNQRVRWRGH 60 SGLTDGLEQG VDLVGGYYDA GDHVKFGLPM AFTVTLLSWG VLEYGAGVSA AAELAHALQA 120 IKWGTDYFIK AHTAPNELWA QVGDGGSDHY CWQRPEDMTT SRRAYKVDAD NPGSEVAAET 180 AAAMAAASLV FRRAGDAHYA HLLLHHAQQL FEFADRYRGR YDESVEVVKS YYPSSSGYQD 240 ELLWAALWLH RATGRRDYLE YALANADDFG GTGWAVSEFS WDIKYAGLQV LASELLVEAK 300 ERRLRLSPEQ RAVVEQLRSK GEYY |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 6.0e-101 | 29 | 300 | 272 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-109 | 29 | 300 | 274 | + Glycosyl hydrolase family 9. | ||
PLN02340 | PLN02340 | 1.0e-124 | 29 | 324 | 296 | + endoglucanase | ||
PLN02171 | PLN02171 | 2.0e-130 | 28 | 324 | 297 | + endoglucanase | ||
PLN02420 | PLN02420 | 4.0e-140 | 29 | 324 | 296 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY87457.1 | 0 | 27 | 324 | 34 | 325 | hypothetical protein OsI_08866 [Oryza sativa Indica Group] |
GenBank | EEE56313.1 | 0 | 1 | 295 | 1 | 304 | hypothetical protein OsJ_05399 [Oryza sativa Japonica Group] |
RefSeq | NP_001045907.1 | 0 | 1 | 324 | 1 | 320 | Os02g0151300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002321149.1 | 0 | 7 | 324 | 19 | 330 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002453306.1 | 0 | 28 | 324 | 33 | 329 | hypothetical protein SORBIDRAFT_04g003690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 27 | 295 | 2 | 267 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ksc_A | 0 | 27 | 295 | 2 | 267 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ks8_A | 0 | 27 | 295 | 2 | 267 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 26 | 291 | 2 | 270 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 26 | 291 | 2 | 270 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |