| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00006441m |
| Family | GT4 |
| Protein Properties | Length: 743 Molecular Weight: 82510.9 Isoelectric Point: 7.2146 |
| Chromosome | Chromosome/Scaffold: 043423 Start: 1730 End: 5970 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT4 | 492 | 594 | 3.7e-21 |
| AYFLGKMVWAKGYRELIDLFAKHKSDLEGFKLDIYGNGEDSHEVQSTARKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
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| Protein Sequence Length: 743 Download |
| MASFGVDTRP AAAASGGGGG GGGGVGAGAG AGEGALSFLS RGLREDLRLI RARAGELETF 60 LNAPVAEPEL LARLRRAYSS SASSARTRLD LSAIGKAFEA ESWRGARGQA GWRWEEEAEE 120 WEPVRLVKAR LRELERRAQG QSASDMLQKV KLSLKSMSFA PEASEDVPPL DLGEIFAYFL 180 KQSVPLFDQL GIKRDVCDKL VESLCSKRKD HHAYNFLSAS EPSSLRNDNV GDELDLRIAS 240 VLQSTGHHCE GGFWRDVQKS DISDKRHVAI VTTASLPWMT GTAVNPLFRA AYLAKSSKQN 300 VTLVVPWLCK SDQELVYPNS MTFNSPEEQE NYMRNWLEER VGFKTDFKIS FYPGKFQKER 360 RSIIPAGDTS QFIPSKEADI AILEEPEHLN WYHHGKRWTD KFNHVVGVVH TNYLEYIKRE 420 KNGAIQAFFV KHINNLVARA YCHKILRLSG ATQDLPKSMI CNVHGVNPKF LEVGERIAAE 480 QESGQQSFSK GAYFLGKMVW AKGYRELIDL FAKHKSDLEG FKLDIYGNGE DSHEVQSTAR 540 KLNLNLNFHK GRDHADDSLH GYKVFINPSI SDVLCTATAE ALAMGKFVVC ADHPSNDFFR 600 SFPNCLTYKT SEDFVARVKE AMTRDPQPLT PEQRYNLSWE AATQRFMEHS ELDNVLNGSN 660 DCSSSGTELD GSAGRRTRRS VSAPSISDVV DGGLAFAHYC LTGSELLRLS TGAVPGTRDY 720 NKQHSADLRL LPPQVQNPIY GW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 1.0e-10 | 349 | 657 | 341 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 2.0e-11 | 266 | 648 | 399 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02501 | PLN02501 | 0 | 96 | 742 | 654 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 263 | 733 | 471 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA91566.1 | 0 | 1 | 734 | 1 | 728 | digalactosyldiacylglycerol synthase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACN33383.1 | 0 | 1 | 742 | 1 | 739 | unknown [Zea mays] |
| GenBank | EAY80028.1 | 0 | 1 | 742 | 1 | 683 | hypothetical protein OsI_35196 [Oryza sativa Indica Group] |
| RefSeq | NP_001065806.1 | 0 | 1 | 742 | 1 | 736 | Os11g0158400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002449031.1 | 0 | 1 | 715 | 1 | 711 | hypothetical protein SORBIDRAFT_05g003730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.003 | 486 | 504 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 408 | 337 | 743 | 0 |
| GO876235 | 352 | 258 | 607 | 0 |
| GO850017 | 333 | 259 | 590 | 0 |
| GO850146 | 328 | 317 | 644 | 0 |
| GO869936 | 324 | 397 | 720 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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