| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00006497m |
| Family | GT14 |
| Protein Properties | Length: 431 Molecular Weight: 47954.4 Isoelectric Point: 11.129 |
| Chromosome | Chromosome/Scaffold: 042156 Start: 133 End: 3023 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT14 | 73 | 333 | 0 |
| FAYLISAASGDAARAARLLAALYHPANTYLLHLDREAPAGEHRRLAELVSARAVYARAGNVWVVGRPNLVTYRGPTMLTTTLHAVALLLRLRRRWDWFVN LSASDYPLVTQDDMMEAFAGLPRDLNFIQHTSHLGWKIKKRARPVILDTALYEDGRAELIRPENITTNLRRLPTAFKLYTGSAWTMLSRPFAEYVTMGWD NLPRTLLLYHANIVSSPEFYFQTVACNSLRFRNATVNHDLHFIRWDNPPKQHPLHLTARDY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MALRARLMGP GRGPRVLLLL SAAFTALLVA SILLLPSLLL RTGGARGPSF LLSSPAAGDL 60 QQEQQDQRYP VSFAYLISAA SGDAARAARL LAALYHPANT YLLHLDREAP AGEHRRLAEL 120 VSARAVYARA GNVWVVGRPN LVTYRGPTML TTTLHAVALL LRLRRRWDWF VNLSASDYPL 180 VTQDDMMEAF AGLPRDLNFI QHTSHLGWKI KKRARPVILD TALYEDGRAE LIRPENITTN 240 LRRLPTAFKL YTGSAWTMLS RPFAEYVTMG WDNLPRTLLL YHANIVSSPE FYFQTVACNS 300 LRFRNATVNH DLHFIRWDNP PKQHPLHLTA RDYRRMLLSG APFARKFREG DPVLDRIDRD 360 ILRRRGPGQF AYGGWCAGDG DGDGGAAALC GNPQEPRRKG AVRAGAGARR LKVLLGKALA 420 PGNLRRRQCR * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 6.0e-63 | 73 | 337 | 269 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 3.0e-124 | 73 | 353 | 283 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33323.1 | 0 | 17 | 430 | 5 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
| GenBank | ACN36394.1 | 0 | 46 | 430 | 46 | 430 | unknown [Zea mays] |
| RefSeq | NP_001064674.1 | 0 | 70 | 430 | 62 | 420 | Os10g0437000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002270685.1 | 0 | 68 | 430 | 41 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002467195.1 | 0 | 46 | 430 | 41 | 426 | hypothetical protein SORBIDRAFT_01g021260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000000004 | 64 | 296 | 79 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000000004 | 64 | 296 | 79 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000000004 | 64 | 296 | 79 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000000004 | 64 | 296 | 79 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000001 | 64 | 296 | 79 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
