y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00006498m |
Family | GH1 |
Protein Properties | Length: 565 Molecular Weight: 61876.6 Isoelectric Point: 7.0009 |
Chromosome | Chromosome/Scaffold: 045336 Start: 1703 End: 5697 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 48 | 510 | 0 |
DAFPKGFVFGTATSAFQVEGAAASGGRGASIWDPFVHTPGNIAGDANADVATDEYHRYKEDVDLMKSLNFDAYRFSISWSRIFPDGEGKVNEEGVQYYNN LIDYMIKQGLTPYVNLNHYDLPLALQKKYKGWLGPKIVDIFADYADFCFKTFGDRVKNWFTLNEPRIVAFLGYDTGADPPNRCTQCAAGGNSATEPYIVA HNIILSHATAVARYRNKYQATQKGKVGIVLDFNWYEPLTNSTEDQAAAQRARDFHAGWFLDPLINGQYPKTMQDIVKDRLPSFTPEQAKLVKGSSDYFGI NQYTTYYISDKQTPQQAATSYSSDWSVQYNFQRNGVPIGQLAHSVWLYIVPTGMSGVVNYLKEKYQNPTIIISENGMDQPGNLTREEYLHDTVRVDFYRN YLTELKKGIDGGANVVAYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSAYWFRDMLS |
Full Sequence |
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Protein Sequence Length: 565 Download |
MGAAGSAAPP AAAAHCRRVL LALALVSLCG RGLRVRAAGA DTGGLSRDAF PKGFVFGTAT 60 SAFQVEGAAA SGGRGASIWD PFVHTPGNIA GDANADVATD EYHRYKEDVD LMKSLNFDAY 120 RFSISWSRIF PDGEGKVNEE GVQYYNNLID YMIKQGLTPY VNLNHYDLPL ALQKKYKGWL 180 GPKIVDIFAD YADFCFKTFG DRVKNWFTLN EPRIVAFLGY DTGADPPNRC TQCAAGGNSA 240 TEPYIVAHNI ILSHATAVAR YRNKYQATQK GKVGIVLDFN WYEPLTNSTE DQAAAQRARD 300 FHAGWFLDPL INGQYPKTMQ DIVKDRLPSF TPEQAKLVKG SSDYFGINQY TTYYISDKQT 360 PQQAATSYSS DWSVQYNFQR NGVPIGQLAH SVWLYIVPTG MSGVVNYLKE KYQNPTIIIS 420 ENGMDQPGNL TREEYLHDTV RVDFYRNYLT ELKKGIDGGA NVVAYFAWSL LDNFEWLSGY 480 TSKFGIVYVD FTTLKRYPKD SAYWFRDMLS GAGSKSATPQ TGSDTSAGSP AGSAPAASSG 540 PALLVSLLVS LFVLVPSAFV VSSA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 2.0e-127 | 46 | 511 | 474 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 3.0e-128 | 33 | 511 | 487 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-138 | 49 | 508 | 469 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-150 | 51 | 505 | 455 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-175 | 46 | 513 | 472 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX95520.1 | 0 | 32 | 538 | 32 | 579 | Putative Glycosyl hydrolase family 1 protein [Oryza sativa Japonica Group] |
GenBank | EEC76023.1 | 0 | 32 | 534 | 32 | 540 | hypothetical protein OsI_13187 [Oryza sativa Indica Group] |
RefSeq | NP_001051014.1 | 0 | 32 | 538 | 32 | 544 | Os03g0703100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151026.1 | 0 | 1 | 539 | 1 | 539 | LOC100284659 [Zea mays] |
RefSeq | XP_002464026.1 | 0 | 13 | 564 | 15 | 567 | hypothetical protein SORBIDRAFT_01g010825 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Structure Of Fragment Of Human End-Binding Protein 1 (Eb1) Containing The N-Terminal Domain At 1.35 A Resolution |
PDB | 2rgm_A | 0 | 43 | 510 | 13 | 480 | A Chain A, Structure Of Fragment Of Human End-Binding Protein 1 (Eb1) Containing The N-Terminal Domain At 1.35 A Resolution |
PDB | 2rgl_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |