y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00006523m |
Family | GH9 |
Protein Properties | Length: 521 Molecular Weight: 56479.6 Isoelectric Point: 5.2054 |
Chromosome | Chromosome/Scaffold: 044070 Start: 1511 End: 3721 |
Description | glycosyl hydrolase 9B7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 50 | 507 | 0 |
KYAEALAVALQFFQVQKSGRLVKNEIPWRGDSALDDGKEAKLDLSKGMYDAGDHMKFGFTLAFTGTMLSWSVLEYGAAMGAAKQRDAAMDALGWIMDFLI NAHPSDDVLYIQVGDPKADHKCWERPETMAEKRPLTKITTKSPGSDVAAETAAAMAAASLVYKPINGTYSSSLLDHAERLFAFADKHRGSYTRTFPELSA YYNSTTYQDELLWAASWLYHATGNHSYLSYATGKNGEEYGDLGNPRYFSWDDKRAGTEVLLSRVSFFAPEGSDVAQDEGLGSYKDTADAVMCILLPESDT AAFRTEGGLLYVAEWNSLQHPVASAFLAAVYSDYMSASGKTELTCSGKSFKAADLRKFAKSQADYVLGDNPMKLSYLVGYGDSYPQRVHHRGASIPADVD TGCDGQEWLKSPKPNPNVATGALVGGPFKNDSFIDDRENVRQNEATTDNSALIVGLLA |
Full Sequence |
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Protein Sequence Length: 521 Download |
MARCCGCSVR CCCWLLLLTL VALAVTATVV FIRYRNGGQV FPLPGVPDPK YAEALAVALQ 60 FFQVQKSGRL VKNEIPWRGD SALDDGKEAK LDLSKGMYDA GDHMKFGFTL AFTGTMLSWS 120 VLEYGAAMGA AKQRDAAMDA LGWIMDFLIN AHPSDDVLYI QVGDPKADHK CWERPETMAE 180 KRPLTKITTK SPGSDVAAET AAAMAAASLV YKPINGTYSS SLLDHAERLF AFADKHRGSY 240 TRTFPELSAY YNSTTYQDEL LWAASWLYHA TGNHSYLSYA TGKNGEEYGD LGNPRYFSWD 300 DKRAGTEVLL SRVSFFAPEG SDVAQDEGLG SYKDTADAVM CILLPESDTA AFRTEGGLLY 360 VAEWNSLQHP VASAFLAAVY SDYMSASGKT ELTCSGKSFK AADLRKFAKS QADYVLGDNP 420 MKLSYLVGYG DSYPQRVHHR GASIPADVDT GCDGQEWLKS PKPNPNVATG ALVGGPFKND 480 SFIDDRENVR QNEATTDNSA LIVGLLAGLV STSSVAQSLS * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 3.0e-140 | 51 | 511 | 470 | + endoglucanase | ||
PLN02340 | PLN02340 | 3.0e-144 | 51 | 518 | 477 | + endoglucanase | ||
PLN00119 | PLN00119 | 2.0e-146 | 51 | 509 | 467 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-160 | 51 | 507 | 460 | + Glycosyl hydrolase family 9. | ||
PLN02345 | PLN02345 | 0 | 54 | 520 | 469 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ02358.1 | 0 | 1 | 520 | 1 | 518 | hypothetical protein OsI_24462 [Oryza sativa Indica Group] |
GenBank | EAZ38281.1 | 0 | 1 | 520 | 1 | 494 | hypothetical protein OsJ_22659 [Oryza sativa Japonica Group] |
GenBank | EEC84946.1 | 0 | 41 | 520 | 45 | 528 | hypothetical protein OsI_32163 [Oryza sativa Indica Group] |
RefSeq | NP_001058583.1 | 0 | 1 | 520 | 1 | 518 | Os06g0715300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002439027.1 | 0 | 1 | 520 | 1 | 522 | hypothetical protein SORBIDRAFT_10g030140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 51 | 511 | 5 | 430 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1ksc_A | 0 | 51 | 511 | 5 | 430 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1ks8_A | 0 | 51 | 511 | 5 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 50 | 510 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 50 | 510 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |