Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00007129m |
Family | GH17 |
Protein Properties | Length: 336 Molecular Weight: 34670.3 Isoelectric Point: 4.5667 |
Chromosome | Chromosome/Scaffold: 047635 Start: 1189 End: 3100 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 334 | 0 |
VGVSYGMSGDNLPPASTVVGMYKANGIPLMRIYAPDQAALQAVGGTGIRVVVGAPNDVLSSLAASPAAAASWVRNNIQAYPDVTFRCVCVGNEVEGAAAR DLVPAMENVRAALAAAGLDGIKVTTSVSQAILGGYKPPSAADFTAEAQGFMGPVLGFLARTGAPLMASVYPYFTYAANPSAMDLSYALFTAPGAVLQDGD YGYQNLFDATVDSFYVAMGKNGGAGVTLVVSESGWPSAGGVAASPENAALYNQNLINHVGRGTPRHPGAIETILFSMFNENLKESGVEQNWGLFYPNTQR VYPISF |
Full Sequence |
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Protein Sequence Length: 336 Download |
MARQGAASMF ATALLLGVFA NIAPSVESVG VSYGMSGDNL PPASTVVGMY KANGIPLMRI 60 YAPDQAALQA VGGTGIRVVV GAPNDVLSSL AASPAAAASW VRNNIQAYPD VTFRCVCVGN 120 EVEGAAARDL VPAMENVRAA LAAAGLDGIK VTTSVSQAIL GGYKPPSAAD FTAEAQGFMG 180 PVLGFLARTG APLMASVYPY FTYAANPSAM DLSYALFTAP GAVLQDGDYG YQNLFDATVD 240 SFYVAMGKNG GAGVTLVVSE SGWPSAGGVA ASPENAALYN QNLINHVGRG TPRHPGAIET 300 ILFSMFNENL KESGVEQNWG LFYPNTQRVY PISFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 58 | 325 | 282 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-129 | 29 | 334 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 1 | 334 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | ACG36462.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 precursor [Zea mays] |
RefSeq | NP_001148461.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 [Zea mays] |
RefSeq | NP_001150348.1 | 0 | 1 | 335 | 1 | 336 | lichenase-2 [Zea mays] |
RefSeq | XP_002441003.1 | 0 | 1 | 335 | 1 | 337 | hypothetical protein SORBIDRAFT_09g018750 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1aq0_B | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 29 | 334 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 334 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |