Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00007172m |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 60128.8 Isoelectric Point: 9.0082 |
Chromosome | Chromosome/Scaffold: 045594 Start: 959 End: 4819 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 214 | 506 | 0 |
CLAMRLTTEYFSLDPKEREFPKRDSRQLDGYYHYAIFSDNVLASAVVVNSTITASKDPGRIMLHIVTDALNYPAMMMWFLTNPPTPAAIEVESLDDFKWL PGDFSSRFKLKGVRDPRYTSALNHLRFYLPEVFPSLSKVLLLDHDVVVQKDLSELWGIDMKGKVIGAVETCTSGEGYHRLDSLVDFSNPTIVNKFDAKAC IFAFGMNIFDLNEWRKQGLTATYHKWFQVGKRLRLWKAGSQPLGQLVFYNQTLPLNRRWHVLGLGHDFSIGRDELESAYVIHYSGKFKPWLEI |
Full Sequence |
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Protein Sequence Length: 534 Download |
MRAAVALRAL LIATACGLVF ALLNLPLPDG RAGSTPPGGE RGAGGGGGPR LSVVEQGLIR 60 EARRLNTVAE ERDGQSDESA AEEDERISKS PPDTKEKIWM MQDQLIMAKA YLHFASPQGS 120 AHLVRELKLR IKEIERAISH SSGGSHIPGS ALQKMKAMEQ TLSKAQRTYP RCSQMTSKLR 180 AMTHNSEELV RAHQSESSFL EQVAVRTLPK GHHCLAMRLT TEYFSLDPKE REFPKRDSRQ 240 LDGYYHYAIF SDNVLASAVV VNSTITASKD PGRIMLHIVT DALNYPAMMM WFLTNPPTPA 300 AIEVESLDDF KWLPGDFSSR FKLKGVRDPR YTSALNHLRF YLPEVFPSLS KVLLLDHDVV 360 VQKDLSELWG IDMKGKVIGA VETCTSGEGY HRLDSLVDFS NPTIVNKFDA KACIFAFGMN 420 IFDLNEWRKQ GLTATYHKWF QVGKRLRLWK AGSQPLGQLV FYNQTLPLNR RWHVLGLGHD 480 FSIGRDELES AYVIHYSGKF KPWLEISIPK YRDNWNRHLN YDNAYLQQCN IHG* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02769 | PLN02769 | 5.0e-116 | 101 | 532 | 454 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 5.0e-134 | 103 | 532 | 457 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 3.0e-157 | 59 | 531 | 517 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 74 | 532 | 462 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 56 | 531 | 498 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA94533.1 | 0 | 47 | 532 | 61 | 547 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY81550.1 | 0 | 47 | 532 | 61 | 547 | hypothetical protein OsI_36716 [Oryza sativa Indica Group] |
RefSeq | NP_001068191.1 | 0 | 130 | 532 | 1 | 403 | Os11g0592300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002282102.1 | 0 | 45 | 532 | 99 | 587 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002451032.1 | 0 | 3 | 533 | 13 | 543 | hypothetical protein SORBIDRAFT_05g022970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.001 | 330 | 503 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.001 | 330 | 503 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.001 | 330 | 503 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |