Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00007211m |
Family | GH17 |
Protein Properties | Length: 266 Molecular Weight: 28236.7 Isoelectric Point: 9.4208 |
Chromosome | Chromosome/Scaffold: 043821 Start: 5223 End: 6130 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 266 | 0 |
IGVTYGRRGTTLPPPADVARFLARETLVDRVRLLDADPMLLQALAGTGLAVDVTVPNGVVPRLVSLAFARRWVRENVAPYARATNISRLLVGNEVTTEAN RTLLLALAPAMQNLHTALAAASLHARIKVSTTHSLGVLTTTEQPSAARFRDGYDAAIVKPLLRFLRATGAPFLVNAYPFYGLTGDTLDFALFRVNAGVVD QGSGLVYTNMLDAQLDAVHSAIRRLGFGDVDIAVSET |
Full Sequence |
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Protein Sequence Length: 266 Download |
MALPTVVLVQ ILLPVLLAFS AIQGADGGGI GVTYGRRGTT LPPPADVARF LARETLVDRV 60 RLLDADPMLL QALAGTGLAV DVTVPNGVVP RLVSLAFARR WVRENVAPYA RATNISRLLV 120 GNEVTTEANR TLLLALAPAM QNLHTALAAA SLHARIKVST THSLGVLTTT EQPSAARFRD 180 GYDAAIVKPL LRFLRATGAP FLVNAYPFYG LTGDTLDFAL FRVNAGVVDQ GSGLVYTNML 240 DAQLDAVHSA IRRLGFGDVD IAVSET |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 8.0e-49 | 41 | 266 | 231 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ86292.1 | 0 | 24 | 266 | 772 | 1021 | H0124B04.9 [Oryza sativa (indica cultivar-group)] |
EMBL | CBI23036.1 | 0 | 15 | 266 | 9 | 260 | unnamed protein product [Vitis vinifera] |
GenBank | EEC78268.1 | 0 | 23 | 266 | 467 | 717 | hypothetical protein OsI_17962 [Oryza sativa Indica Group] |
RefSeq | NP_001151529.1 | 0 | 20 | 266 | 19 | 266 | LOC100285163 [Zea mays] |
RefSeq | XP_002448791.1 | 0 | 24 | 266 | 25 | 269 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 1e-37 | 30 | 266 | 2 | 241 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_C | 1e-37 | 30 | 266 | 2 | 241 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_B | 1e-37 | 30 | 266 | 2 | 241 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_A | 1e-37 | 30 | 266 | 2 | 241 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3em5_D | 1e-37 | 30 | 266 | 2 | 241 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |