| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00007501m |
| Family | GT14 |
| Protein Properties | Length: 419 Molecular Weight: 45753.5 Isoelectric Point: 7.8955 |
| Chromosome | Chromosome/Scaffold: 043633 Start: 422 End: 4551 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT14 | 75 | 327 | 0 |
| LAFLLAGSAGDADRLLRLLLATYHPRNTYLLLLDRAASDADRARLARNARAAPDRDNVHVVGDPGFANPRGASALAATLHGAALLLRVGRGWDWFVHLDA ADYPLVTPDDLLHVFSYLPKDLNFIQHSSYIGWKEARQIRPIIVDPGLYLSSRNDIFYATQKRDLPNAYKLFTGSSSVILSRKFIEYCIVGMDNLPRTLL MYYTNMPLPHRKYFQTVLCNSPEFNRTVVNHDLHYSTWDASSKNEPRLLTMAD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 419 Download |
| MQSAAAAAPS AQPSSVFPKD SRPLPCLLLA SLLLLLLLHL LSSSPAASPP PPPRLAPLPV 60 TAAAVASAGP PPPALAFLLA GSAGDADRLL RLLLATYHPR NTYLLLLDRA ASDADRARLA 120 RNARAAPDRD NVHVVGDPGF ANPRGASALA ATLHGAALLL RVGRGWDWFV HLDAADYPLV 180 TPDDLLHVFS YLPKDLNFIQ HSSYIGWKEA RQIRPIIVDP GLYLSSRNDI FYATQKRDLP 240 NAYKLFTGSS SVILSRKFIE YCIVGMDNLP RTLLMYYTNM PLPHRKYFQT VLCNSPEFNR 300 TVVNHDLHYS TWDASSKNEP RLLTMADVEN MTKSGAAFGT RFPKDDPVLD HIDAEILHRL 360 PGEFVTGGWC VGVGDDSPCD VPGNLDVLRP GPASAKLAKF LAERLSYRSF YSQQCIWD* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 2.0e-36 | 131 | 332 | 206 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 2.0e-104 | 97 | 415 | 323 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO17353.1 | 0 | 16 | 418 | 19 | 417 | Hypothetical protein [Oryza sativa Japonica Group] |
| RefSeq | XP_002282998.1 | 0 | 66 | 416 | 77 | 430 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299292.1 | 0 | 24 | 416 | 24 | 426 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002468516.1 | 0 | 1 | 418 | 1 | 417 | hypothetical protein SORBIDRAFT_01g047240 [Sorghum bicolor] |
| RefSeq | XP_002518166.1 | 0 | 72 | 418 | 89 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0004 | 72 | 273 | 85 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0004 | 72 | 273 | 85 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0004 | 72 | 273 | 85 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0004 | 72 | 273 | 85 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0008 | 72 | 273 | 85 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
