| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00007769m |
| Family | AA1 |
| Protein Properties | Length: 575 Molecular Weight: 63272 Isoelectric Point: 8.4122 |
| Chromosome | Chromosome/Scaffold: 045475 Start: 2908 End: 5221 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 21 | 565 | 0 |
| AATVEHTFDVGNFSISQLCQPARVITAVNSQLPGPTIHVHEGDTVAVHVLNNSPYNITIHWYRGTQWADGPEMVTQCPIRPGSSYTYRYNVTGQEGTLWW HAHSSMLRATVHGAIVIRPRNGGQGYPFPEPHKEEIIMLEINHLVGEWWNRNVFDLARDAFLAGTLVDPADAYTINGEPGDLHKCSGSNRKPRTFKLKVQ SNRTYLLRIINAGVNTPMFFKIAGHNFTVVGADASYTTPYETDVVVVSPGQTVDALMVAGARPSRRYYMAASPYDSAHPSVPFREGAATAVVEYAGAPGR ARRRRPLLAPRPQFNDTATAHRFFTSLTALVRPGRRTVPLAVDTRMLVTVGLGSADCRPEQTRCKQQGFAVAASMNNASFELPTTMSLLEAHFRNVTGIY TRDFPDRPPLEFDYARPPGNMDATTSKSTKVRTVRYNATVEVVLQNTGLVARESHPMHLHGHNFFVLAQGFGNFHQDTAVGQYNLVNPQERNTLAVPPGG WAVIRFIANNPGMWIMHCHFDAHLPIGLAMAFEVLDGPTPETALP | |||
| Full Sequence |
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| Protein Sequence Length: 575 Download |
| MARCCWLLLL ALALVARCGH AATVEHTFDV GNFSISQLCQ PARVITAVNS QLPGPTIHVH 60 EGDTVAVHVL NNSPYNITIH WYRGTQWADG PEMVTQCPIR PGSSYTYRYN VTGQEGTLWW 120 HAHSSMLRAT VHGAIVIRPR NGGQGYPFPE PHKEEIIMLE INHLVGEWWN RNVFDLARDA 180 FLAGTLVDPA DAYTINGEPG DLHKCSGSNR KPRTFKLKVQ SNRTYLLRII NAGVNTPMFF 240 KIAGHNFTVV GADASYTTPY ETDVVVVSPG QTVDALMVAG ARPSRRYYMA ASPYDSAHPS 300 VPFREGAATA VVEYAGAPGR ARRRRPLLAP RPQFNDTATA HRFFTSLTAL VRPGRRTVPL 360 AVDTRMLVTV GLGSADCRPE QTRCKQQGFA VAASMNNASF ELPTTMSLLE AHFRNVTGIY 420 TRDFPDRPPL EFDYARPPGN MDATTSKSTK VRTVRYNATV EVVLQNTGLV ARESHPMHLH 480 GHNFFVLAQG FGNFHQDTAV GQYNLVNPQE RNTLAVPPGG WAVIRFIANN PGMWIMHCHF 540 DAHLPIGLAM AFEVLDGPTP ETALPPPPAD LPQC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-42 | 35 | 142 | 114 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 3.0e-65 | 1 | 552 | 580 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-72 | 39 | 553 | 541 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-84 | 23 | 553 | 556 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 21 | 557 | 543 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 12 | 574 | 94 | 657 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 25 | 574 | 26 | 576 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE62822.1 | 0 | 25 | 574 | 26 | 543 | hypothetical protein OsJ_17625 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 25 | 574 | 26 | 576 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 12 | 574 | 15 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 43 | 552 | 22 | 521 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 43 | 552 | 22 | 521 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 43 | 552 | 22 | 521 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 43 | 552 | 22 | 521 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 43 | 552 | 22 | 521 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
