Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00007977m |
Family | AA1 |
Protein Properties | Length: 592 Molecular Weight: 65637.7 Isoelectric Point: 6.1215 |
Chromosome | Chromosome/Scaffold: 046279 Start: 783 End: 5212 |
Description | Cupredoxin superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 40 | 512 | 0 |
GDAQKVIAINNQFPGPLLNVTTNQNVRVNVQNNLDEPLLITWDGIQMRMNSWQDGVSGTNCPIPPGWNWTYQFQLKDQIGSFFYFPSLGLQRAAGGYGPI TVNNRATVPVPFGQPDGDITLFIGDWYTKSHIELRNMLDDGRDLGAPDAILINGRAPYRYDTTLVPDGLQYEIVGVEPGKTYRFRVHNVGISTSLNFRIQ NHNMLLVEAEGTYTNQQNYTNLDIHVGQSYSFLVTMDQNASTDYYIVASPRFISNPQRSQVTGVAILQYSNSKGNASGPLPDAPNDYYDKYYSINQARSI RMNTSAGAARPNPQGSFHYGSINITQTFVLKNEAPLRINGKRRRTINRISYSPPETPLRLADLHNLTGVYTTDFPAMPSNVPAKIASSALNASYKGFLEI VFQNNDTDVQAYHLDGYSFFVVGMDYGEWTPDRRNEYNRWDAISRCTTQVFPGGWTAVLVSLDNVGIWNLRAE |
Full Sequence |
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Protein Sequence Length: 592 Download |
MAAAAAAMVA AVSLAAVLAS AAAQAEVRWE VSYLTLEPLG DAQKVIAINN QFPGPLLNVT 60 TNQNVRVNVQ NNLDEPLLIT WDGIQMRMNS WQDGVSGTNC PIPPGWNWTY QFQLKDQIGS 120 FFYFPSLGLQ RAAGGYGPIT VNNRATVPVP FGQPDGDITL FIGDWYTKSH IELRNMLDDG 180 RDLGAPDAIL INGRAPYRYD TTLVPDGLQY EIVGVEPGKT YRFRVHNVGI STSLNFRIQN 240 HNMLLVEAEG TYTNQQNYTN LDIHVGQSYS FLVTMDQNAS TDYYIVASPR FISNPQRSQV 300 TGVAILQYSN SKGNASGPLP DAPNDYYDKY YSINQARSIR MNTSAGAARP NPQGSFHYGS 360 INITQTFVLK NEAPLRINGK RRRTINRISY SPPETPLRLA DLHNLTGVYT TDFPAMPSNV 420 PAKIASSALN ASYKGFLEIV FQNNDTDVQA YHLDGYSFFV VGMDYGEWTP DRRNEYNRWD 480 AISRCTTQVF PGGWTAVLVS LDNVGIWNLR AEKLDNWYRG QEVYVKVPDP LGYNITEMVT 540 PDNVLYCGLL KDRQKPQVHE SNSKSSAQAE AGYSSRFLAT VMLAVAAVIF S* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 3.0e-175 | 29 | 548 | 521 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 29 | 588 | 564 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 29 | 557 | 534 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 29 | 548 | 530 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 29 | 548 | 521 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC55686.1 | 0 | 26 | 589 | 34 | 598 | putative pectinesterase [Oryza sativa Japonica Group] |
GenBank | EEC82918.1 | 0 | 26 | 589 | 32 | 574 | hypothetical protein OsI_27845 [Oryza sativa Indica Group] |
GenBank | EEE68063.1 | 0 | 26 | 589 | 34 | 605 | hypothetical protein OsJ_26072 [Oryza sativa Japonica Group] |
RefSeq | NP_001151974.1 | 0 | 26 | 591 | 10 | 577 | LOC100285611 [Zea mays] |
RefSeq | XP_002445068.1 | 0 | 26 | 591 | 23 | 587 | hypothetical protein SORBIDRAFT_07g003590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 523 | 7 | 519 | A Chain A, Crystal Structure Of Mouse Alpha-tocopherol Transfer Protein In Complex With Alpha-tocopherol And Phosphatidylinositol-(3,4)- Bisphosphate |
PDB | 1asq_A | 0 | 28 | 523 | 7 | 519 | A Chain A, Crystal Structure Of Mouse Alpha-tocopherol Transfer Protein In Complex With Alpha-tocopherol And Phosphatidylinositol-(3,4)- Bisphosphate |
PDB | 1asp_B | 0 | 28 | 523 | 7 | 519 | A Chain A, Crystal Structure Of Mouse Alpha-tocopherol Transfer Protein In Complex With Alpha-tocopherol And Phosphatidylinositol-(3,4)- Bisphosphate |
PDB | 1asp_A | 0 | 28 | 523 | 7 | 519 | A Chain A, Crystal Structure Of Mouse Alpha-tocopherol Transfer Protein In Complex With Alpha-tocopherol And Phosphatidylinositol-(3,4)- Bisphosphate |
PDB | 1aso_B | 0 | 28 | 523 | 7 | 519 | A Chain A, Crystal Structure Of Mouse Alpha-tocopherol Transfer Protein In Complex With Alpha-tocopherol And Phosphatidylinositol-(3,4)- Bisphosphate |