y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00008025m |
Family | CE10 |
Protein Properties | Length: 353 Molecular Weight: 37934.3 Isoelectric Point: 6.4027 |
Chromosome | Chromosome/Scaffold: 047317 Start: 4514 End: 5572 |
Description | carboxyesterase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 48 | 339 | 0 |
SLADRQARASARPDGLGVVSADVDVDASRGLWARVFSPSSSVVDPTAPALPVVVYFHGGGFTLLSAASALYDGMCRQFCRELGAVVVSVNYRLAPEHRFP AAYDDGVDVLRYLGSAGLPDLGVPVDLSRCFLAGDSAGGNLTHHVAQRWTDTASAPIRIAGIILLQPYFGGEERTPAELRLEGVAPVVNMRRSDWSWRAF LPEGADRNHPAAHVTGEAAPEPELAEAFPPAMVVIGGMDPLQDWQRRYAAMLERKGKAVQVLEFPEAIHAFYVFPELNDSGKVVKAIKAFMD |
Full Sequence |
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Protein Sequence Length: 353 Download |
MTKTQGTGAA APRAPALPWT VRFRIFALVT ATDIAQRPDG TVNRFMVSLA DRQARASARP 60 DGLGVVSADV DVDASRGLWA RVFSPSSSVV DPTAPALPVV VYFHGGGFTL LSAASALYDG 120 MCRQFCRELG AVVVSVNYRL APEHRFPAAY DDGVDVLRYL GSAGLPDLGV PVDLSRCFLA 180 GDSAGGNLTH HVAQRWTDTA SAPIRIAGII LLQPYFGGEE RTPAELRLEG VAPVVNMRRS 240 DWSWRAFLPE GADRNHPAAH VTGEAAPEPE LAEAFPPAMV VIGGMDPLQD WQRRYAAMLE 300 RKGKAVQVLE FPEAIHAFYV FPELNDSGKV VKAIKAFMDE PRAAQPSQLL SC* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 3.0e-9 | 82 | 142 | 65 | + Carboxylesterase family. | ||
COG2272 | PnbA | 1.0e-9 | 89 | 168 | 82 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 1.0e-21 | 92 | 318 | 229 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 8.0e-32 | 80 | 322 | 243 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-63 | 100 | 319 | 220 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04888.1 | 0 | 3 | 342 | 8 | 349 | hypothetical protein OsI_27070 [Oryza sativa Indica Group] |
RefSeq | NP_001057470.1 | 0 | 13 | 340 | 9 | 351 | Os06g0306600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060441.1 | 0 | 3 | 339 | 8 | 346 | Os07g0643400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151174.1 | 0 | 6 | 342 | 4 | 340 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002463276.1 | 0 | 11 | 347 | 26 | 366 | hypothetical protein SORBIDRAFT_02g041040 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 17 | 339 | 23 | 349 | A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H3 |
PDB | 2zsh_A | 0 | 17 | 339 | 23 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 15 | 339 | 16 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 15 | 339 | 16 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 15 | 339 | 16 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL865493 | 238 | 1 | 238 | 0 |
EG375636 | 249 | 2 | 243 | 0 |
FL786428 | 264 | 8 | 261 | 0 |
FL749525 | 182 | 1 | 182 | 0 |
FL696914 | 181 | 1 | 181 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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