| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00008346m |
| Family | GH1 |
| Protein Properties | Length: 172 Molecular Weight: 19261.3 Isoelectric Point: 4.8121 |
| Chromosome | Chromosome/Scaffold: 004396 Start: 13554 End: 15122 |
| Description | beta glucosidase 10 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 66 | 152 | 1.4e-29 |
| GYATINGSLHDTDRVDYMKNHIRSTLTALRNGANVKGYFAWCFVDVFEYLTGFKSHYGLYRVDFEDQALPRQARLSARWYSEFLKNK | |||
| Full Sequence |
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| Protein Sequence Length: 172 Download |
| MAAAVAAFSL LLFLSAQSAA PVLGFTRGDF LEDFVFGSAT SAYQYEGAVA EDDRSPSIWD 60 TFTHAGYATI NGSLHDTDRV DYMKNHIRST LTALRNGANV KGYFAWCFVD VFEYLTGFKS 120 HYGLYRVDFE DQALPRQARL SARWYSEFLK NKEIQIREEN ELDDAGSHAQ Q* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00232 | Glyco_hydro_1 | 7.0e-12 | 26 | 77 | 52 | + Glycosyl hydrolase family 1. | ||
| PLN02998 | PLN02998 | 2.0e-13 | 23 | 70 | 48 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 4.0e-21 | 76 | 152 | 77 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 2.0e-21 | 71 | 150 | 80 | + beta-glucosidase | ||
| pfam00232 | Glyco_hydro_1 | 5.0e-22 | 70 | 154 | 85 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN33889.1 | 0 | 66 | 171 | 172 | 275 | unknown [Zea mays] |
| RefSeq | NP_001136681.1 | 4e-25 | 1 | 66 | 1 | 66 | hypothetical protein LOC100216811 [Zea mays] |
| RefSeq | NP_001136681.1 | 0 | 66 | 171 | 285 | 388 | hypothetical protein LOC100216811 [Zea mays] |
| RefSeq | XP_002458667.1 | 7e-25 | 1 | 66 | 1 | 66 | hypothetical protein SORBIDRAFT_03g037780 [Sorghum bicolor] |
| RefSeq | XP_002458667.1 | 0 | 66 | 171 | 407 | 509 | hypothetical protein SORBIDRAFT_03g037780 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vii_A | 5e-16 | 72 | 157 | 390 | 476 | A Chain A, Crystal Structure Of Aggregated Form Of Dj1 |
| PDB | 3vii_A | 0.00004 | 30 | 64 | 12 | 46 | A Chain A, Crystal Structure Of Aggregated Form Of Dj1 |
| PDB | 3vih_A | 5e-16 | 72 | 157 | 390 | 476 | A Chain A, Crystal Structure Of Aggregated Form Of Dj1 |
| PDB | 3vih_A | 0.00004 | 30 | 64 | 12 | 46 | A Chain A, Crystal Structure Of Aggregated Form Of Dj1 |
| PDB | 3vig_A | 5e-16 | 72 | 157 | 390 | 476 | A Chain A, Crystal Structure Of Aggregated Form Of Dj1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Signal Peptide | ||||
|---|---|---|---|---|
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| Cleavage Site | ||||
| 19 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG782254 | 152 | 21 | 172 | 0 |
| JG881897 | 152 | 21 | 172 | 0 |
| JG954327 | 149 | 24 | 172 | 0 |
| JG905610 | 147 | 26 | 172 | 0 |
| JG782255 | 131 | 42 | 172 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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