Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00008370m |
Family | CE10 |
Protein Properties | Length: 376 Molecular Weight: 40175.5 Isoelectric Point: 7.8778 |
Chromosome | Chromosome/Scaffold: 005471 Start: 292 End: 1419 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 53 | 319 | 0 |
RDVVIDPATGVSARLFLSVGAVATGRRLPLVVYFHGGAFCTGSAFSELFHRYAASLSARAGALVVSVEYRLAPEHPIPAAYEDAWVALRWAATRSDPWLA FHADPTRMFLAGESAGANIVHSVAARVAAGGEDICIEGMVLLQPFFWGTERLPAETGRHDGPVFSPEFVDTLWPFLTAGAAGNDDPRISPPAEQVASLPC RRVLVGVAAKDVARDRGCRYAAWLRRGERRREVTLLESKGKDHGFHLYRPGCASAVALMDRVAEFIS |
Full Sequence |
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Protein Sequence Length: 376 Download |
MSSAPATRNA ESEIVDDMRP FLRTYKCGRV ERLVPDAFVP ASEDPGATGV ATRDVVIDPA 60 TGVSARLFLS VGAVATGRRL PLVVYFHGGA FCTGSAFSEL FHRYAASLSA RAGALVVSVE 120 YRLAPEHPIP AAYEDAWVAL RWAATRSDPW LAFHADPTRM FLAGESAGAN IVHSVAARVA 180 AGGEDICIEG MVLLQPFFWG TERLPAETGR HDGPVFSPEF VDTLWPFLTA GAAGNDDPRI 240 SPPAEQVASL PCRRVLVGVA AKDVARDRGC RYAAWLRRGE RRREVTLLES KGKDHGFHLY 300 RPGCASAVAL MDRVAEFISG WAPSVNADAE TERLHAREGT NKKTGRAAFA DGPDNKVSGS 360 PGPRAVGIAV AKSRL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 2.0e-8 | 67 | 173 | 119 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 1.0e-8 | 36 | 183 | 162 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 2.0e-10 | 77 | 173 | 110 | + Carboxylesterase family. | ||
COG0657 | Aes | 3.0e-30 | 32 | 318 | 289 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-55 | 83 | 299 | 218 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83270.1 | 0 | 17 | 375 | 20 | 396 | putative cell death associated protein [Oryza sativa Japonica Group] |
DDBJ | BAC83639.1 | 0 | 13 | 319 | 13 | 327 | putative cell death associated protein [Oryza sativa Japonica Group] |
GenBank | EAZ04120.1 | 0 | 3 | 319 | 2 | 328 | hypothetical protein OsI_26265 [Oryza sativa Indica Group] |
GenBank | EAZ40076.1 | 0 | 3 | 319 | 2 | 328 | hypothetical protein OsJ_24521 [Oryza sativa Japonica Group] |
GenBank | EAZ40077.1 | 0 | 13 | 319 | 13 | 327 | hypothetical protein OsJ_24522 [Oryza sativa Japonica Group] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 6e-39 | 41 | 278 | 43 | 291 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 2o7r_A | 6e-39 | 41 | 278 | 43 | 291 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 4e-34 | 36 | 319 | 49 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 4e-34 | 36 | 319 | 49 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 4e-34 | 36 | 319 | 49 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY822650 | 322 | 3 | 318 | 0 |
CX623064 | 226 | 18 | 231 | 0 |
ES789979 | 323 | 10 | 319 | 0 |
EG631325 | 323 | 10 | 319 | 0 |
DW118773 | 322 | 2 | 319 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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