Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00008599m |
Family | GH9 |
Protein Properties | Length: 431 Molecular Weight: 45967.8 Isoelectric Point: 8.315 |
Chromosome | Chromosome/Scaffold: 005016 Start: 77 End: 1577 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 4 | 422 | 0 |
KVDLVGGYYDAGDNVKFGLPMAFTTTMLAWSVADMGKFMGGELPHARAAVRWGADYLLKAATSTPGTLYVQVGDPNQDHRCWERPEDMDTPRSVYAVTAD RPGSDVAAETAAALAASAVAFRRADPAYSSRLLGAAERAFELADRHRGSYSDGALSPAVCPFYCSYSGYQDELLWAAAWLHRASGNASFLSYVRANGMQL GAGDDDFSFSWDDKRAGTKVLLARGFLRRRLPGMQLYKAHSDSYICSLVPGTGSFQASQFTPGGLIYRGEGGSNMQYVTTATFLLVAYARYLRSAGAAAA CGGLEVAPAELAAVARRQVDYILGKNPAGTSYMVGFGGRFPRRLHHRGASMPSVRAHPARIGCDEGFRYLHGGAPDANVLVGAVVGGPDARDGFVDDRDG YGQTEPATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 431 Download |
MKKKVDLVGG YYDAGDNVKF GLPMAFTTTM LAWSVADMGK FMGGELPHAR AAVRWGADYL 60 LKAATSTPGT LYVQVGDPNQ DHRCWERPED MDTPRSVYAV TADRPGSDVA AETAAALAAS 120 AVAFRRADPA YSSRLLGAAE RAFELADRHR GSYSDGALSP AVCPFYCSYS GYQDELLWAA 180 AWLHRASGNA SFLSYVRANG MQLGAGDDDF SFSWDDKRAG TKVLLARGFL RRRLPGMQLY 240 KAHSDSYICS LVPGTGSFQA SQFTPGGLIY RGEGGSNMQY VTTATFLLVA YARYLRSAGA 300 AAACGGLEVA PAELAAVARR QVDYILGKNP AGTSYMVGFG GRFPRRLHHR GASMPSVRAH 360 PARIGCDEGF RYLHGGAPDA NVLVGAVVGG PDARDGFVDD RDGYGQTEPA TYINAPLVGA 420 LAYFAGTAKY * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-143 | 4 | 422 | 423 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-147 | 4 | 422 | 426 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 5.0e-153 | 5 | 425 | 423 | + cellulase | ||
PLN02308 | PLN02308 | 1.0e-163 | 5 | 425 | 421 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 4 | 425 | 422 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA77239.1 | 0 | 5 | 425 | 74 | 491 | endo-1,4-beta glucanase [Populus alba] |
GenBank | EAZ05384.1 | 0 | 4 | 429 | 76 | 504 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ41304.1 | 0 | 4 | 429 | 76 | 504 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
RefSeq | NP_001060848.1 | 0 | 4 | 429 | 95 | 523 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002443762.1 | 0 | 2 | 429 | 70 | 501 | hypothetical protein SORBIDRAFT_07g001480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 6 | 422 | 47 | 426 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1ksc_A | 0 | 6 | 422 | 47 | 426 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1ks8_A | 0 | 6 | 422 | 47 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 5 | 422 | 47 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 5 | 422 | 47 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT339454 | 283 | 7 | 289 | 0 |
HO788388 | 402 | 27 | 426 | 0 |
DT339455 | 265 | 7 | 271 | 0 |
DV700301 | 263 | 5 | 267 | 0 |
DV466663 | 252 | 5 | 256 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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