| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00008852m |
| Family | AA1 |
| Protein Properties | Length: 571 Molecular Weight: 62369.7 Isoelectric Point: 7.4107 |
| Chromosome | Chromosome/Scaffold: 005744 Start: 12464 End: 14717 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 333 | 549 | 5.60519e-43 |
| PPAGRAWNDTMYRFRQSVATVAHPAHVEPPPPRADRTILLLNTQNKIDGRIKWALNNVSFRLPHTPYLVAMKRGLAGAFDQRPPPEKYAHQTYDIYAKPP NPNATSSDGLYRLRFGSVVDVVLQNANMLDDNRSETHPWHLHGHDFWVLGYGIGRFDPAVHPATYNLRDPILKNTVAVHPYGWTALRFKADNPGVWAFHC HIEAHFLMGMGIVFEEG | |||
| AA1 | 57 | 349 | 0 |
| QTPGPTIRATQGNTVVVRVSNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGDVFTYTFAVDHPGTYMYHAHYGMQRSAGLNGMIVVAAAPGGRA AEPFAYDGEHDILLNDWWHNSTQEQATGLASVPIRWVGEPHSLLINGRGNFNCSAAAAGTCDATLTECAAPVFDVVPGKTYRFRIASLTSLSALNFEIEG HPMTVVEADGHYVKPFVVDSLSIYSGETYSVLIKADQDPNRNYWLASNVVGRQPGTPTGTAVLSYPGAPRSPPSTPPPAGRAWNDTMYRFRQS | |||
| Full Sequence |
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| Protein Sequence Length: 571 Download |
| MAASLAGPGR RLLCCLFLCL SLSAAARAAT LHHEWEISYQ FKSPDCVRKL AVTINGQTPG 60 PTIRATQGNT VVVRVSNSLL TENVAIHWHG IRQIGTPWAD GTEGVTQCPI LPGDVFTYTF 120 AVDHPGTYMY HAHYGMQRSA GLNGMIVVAA APGGRAAEPF AYDGEHDILL NDWWHNSTQE 180 QATGLASVPI RWVGEPHSLL INGRGNFNCS AAAAGTCDAT LTECAAPVFD VVPGKTYRFR 240 IASLTSLSAL NFEIEGHPMT VVEADGHYVK PFVVDSLSIY SGETYSVLIK ADQDPNRNYW 300 LASNVVGRQP GTPTGTAVLS YPGAPRSPPS TPPPAGRAWN DTMYRFRQSV ATVAHPAHVE 360 PPPPRADRTI LLLNTQNKID GRIKWALNNV SFRLPHTPYL VAMKRGLAGA FDQRPPPEKY 420 AHQTYDIYAK PPNPNATSSD GLYRLRFGSV VDVVLQNANM LDDNRSETHP WHLHGHDFWV 480 LGYGIGRFDP AVHPATYNLR DPILKNTVAV HPYGWTALRF KADNPGVWAF HCHIEAHFLM 540 GMGIVFEEGI ERVTELPPEI MGCGKAKGGH * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 4.0e-83 | 46 | 549 | 542 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 2.0e-105 | 32 | 546 | 544 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 32 | 565 | 542 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 32 | 568 | 543 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 35 | 567 | 542 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27982.1 | 0 | 32 | 570 | 28 | 569 | unknown [Zea mays] |
| RefSeq | NP_001063005.1 | 0 | 11 | 570 | 7 | 577 | Os09g0365900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462284.1 | 0 | 30 | 570 | 26 | 570 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 30 | 570 | 25 | 571 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| RefSeq | XP_002462286.1 | 0 | 26 | 570 | 31 | 579 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 564 | 5 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asq_A | 0 | 32 | 564 | 5 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asp_B | 0 | 32 | 564 | 5 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1asp_A | 0 | 32 | 564 | 5 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1aso_B | 0 | 32 | 564 | 5 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
